Domain ID e4d18J3

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  • A: extended segments
  • X: 26S proteasome regulatory subunits C-terminal helices
  • H: 26S proteasome regulatory subunit RPN9 C-terminal helix
  • T: 26S proteasome regulatory subunit RPN9 C-terminal helix
  • F: Unmapped domains
UID: 001322560
Type: Automatic domain
Parent: e4d10J3
Range: J:403-443
PDB: 4d18
PDB Description: COP9 SIGNALOSOME COMPLEX SUBUNIT 2
UniProt: P61201
Hsap BLAST neighbor: P61201
Species: Homo sapiens

Structure of domain e4d18J3

Domains in the same chain:

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e4d18J2 J:30-332 Repetitive alpha hairpins ARM repeat ARM repeat
e4d18J1 J:333-402 HTH HTH winged
e4d18J3 J:403-443 26S proteasome regulatory subunits C-terminal helices 26S proteasome regulatory subunit RPN9 C-terminal helix 26S proteasome regulatory subunit RPN9 C-terminal helix

Domains in the same PDB:

e4d18A3 A:77-393 Repetitive alpha hairpins ARM repeat ARM repeat
e4d18A2 A:394-454 HTH HTH winged
e4d18A1 A:455-505 26S proteasome regulatory subunits C-terminal helices 26S proteasome regulatory subunit RPN7 C-terminal helix 26S proteasome regulatory subunit RPN7 C-terminal helix
e4d18B2 B:30-332 Repetitive alpha hairpins ARM repeat ARM repeat
e4d18B1 B:333-402 HTH HTH winged
e4d18B3 B:403-443 26S proteasome regulatory subunits C-terminal helices 26S proteasome regulatory subunit RPN9 C-terminal helix 26S proteasome regulatory subunit RPN9 C-terminal helix
e4d18C1 C:3-220 Repetitive alpha hairpins ARM repeat ARM repeat
e4d18C3 C:221-364 HTH HTH winged
e4d18C2 C:365-403 26S proteasome regulatory subunits C-terminal helices 26S proteasome regulatory subunit RPN3 C-terminal helix 26S proteasome regulatory subunit RPN3 C-terminal helix
e4d18D1 D:1-292 Repetitive alpha hairpins ARM repeat ARM repeat
e4d18D2 D:293-364 HTH HTH winged
e4d18D3 D:365-406 26S proteasome regulatory subunits C-terminal helices 26S proteasome regulatory subunit RPN5 C-terminal helix 26S proteasome regulatory subunit RPN5 C-terminal helix
e4d18E2 E:24-250 Cytidine deaminase-like Cytidine deaminase-like Cytidine deaminase-like
e4d18E1 E:251-333 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain
e4d18F1 F:29-207 Cytidine deaminase-like Cytidine deaminase-like Cytidine deaminase-like
e4d18F2 F:208-316 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain
e4d18G3 G:8-86 Repetitive alpha hairpins ARM repeat ARM repeat
e4d18G2 G:87-164 HTH HTH winged
e4d18G1 G:165-215 26S proteasome regulatory subunits C-terminal helices 26S proteasome regulatory subunit RPN9 C-terminal helix 26S proteasome regulatory subunit RPN9 C-terminal helix
e4d18H2 H:11-114 Repetitive alpha hairpins ARM repeat ARM repeat
e4d18H1 H:115-167,H:194-209 HTH HTH winged
e4d18I3 I:77-393 Repetitive alpha hairpins ARM repeat ARM repeat
e4d18I2 I:394-454 HTH HTH winged
e4d18I1 I:455-505 26S proteasome regulatory subunits C-terminal helices 26S proteasome regulatory subunit RPN7 C-terminal helix 26S proteasome regulatory subunit RPN7 C-terminal helix
e4d18J2 J:30-332 Repetitive alpha hairpins ARM repeat ARM repeat
e4d18J1 J:333-402 HTH HTH winged
e4d18J3 J:403-443 26S proteasome regulatory subunits C-terminal helices 26S proteasome regulatory subunit RPN9 C-terminal helix 26S proteasome regulatory subunit RPN9 C-terminal helix
e4d18K1 K:3-220 Repetitive alpha hairpins ARM repeat ARM repeat
e4d18K3 K:221-364 HTH HTH winged
e4d18K2 K:365-403 26S proteasome regulatory subunits C-terminal helices 26S proteasome regulatory subunit RPN3 C-terminal helix 26S proteasome regulatory subunit RPN3 C-terminal helix
e4d18L1 L:1-292 Repetitive alpha hairpins ARM repeat ARM repeat
e4d18L2 L:293-364 HTH HTH winged
e4d18L3 L:365-406 26S proteasome regulatory subunits C-terminal helices 26S proteasome regulatory subunit RPN5 C-terminal helix 26S proteasome regulatory subunit RPN5 C-terminal helix
e4d18M2 M:24-250 Cytidine deaminase-like Cytidine deaminase-like Cytidine deaminase-like
e4d18M1 M:251-333 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain
e4d18N1 N:29-207 Cytidine deaminase-like Cytidine deaminase-like Cytidine deaminase-like
e4d18N2 N:208-316 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain
e4d18O3 O:8-86 Repetitive alpha hairpins ARM repeat ARM repeat
e4d18O2 O:87-164 HTH HTH winged
e4d18O1 O:165-215 26S proteasome regulatory subunits C-terminal helices 26S proteasome regulatory subunit RPN9 C-terminal helix 26S proteasome regulatory subunit RPN9 C-terminal helix
e4d18P2 P:11-114 Repetitive alpha hairpins ARM repeat ARM repeat
e4d18P1 P:115-167,P:194-209 HTH HTH winged

Structural contacts of domain e4d18J3 of H-group "26S proteasome regulatory subunit RPN9 C-terminal helix":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4d18I1 J:x,y,z->I:X,Y,Z 26S proteasome regulatory subunit RPN7 C-terminal helix Interaction Interface Pymol
e4d18I2 J:x,y,z->I:X,Y,Z HTH Interaction Interface Pymol
e4d18I2 J:X,Y,Z->M:x,y,z HTH Interaction Interface Pymol
e4d18L2 J:X,Y,Z->L:x,y,z HTH Interaction Interface Pymol
e4d18N2 J:X,Y,Z->N:x,y,z 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain Interaction Interface Pymol
e4d18K3 J:X,Y,Z->K:x,y,z HTH Interaction Interface Pymol