ECOD: domain e4d18L1

Domain ID e4d18L1

A: alpha superhelices
X: Repetitive alpha hairpins
H: ARM repeat
T: ARM repeat
F: PSMD12-CSN4_N

UID:	001318458
Type:	Automatic domain
Parent:	e4d10D1
Range:	L:1-292
PDB:	4d18
PDB Description:	COP9 SIGNALOSOME COMPLEX SUBUNIT 4
UniProt:	Q9BT78
Hsap BLAST neighbor:	Q9BT78
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e4d18L1

Domains in the same chain:

Download Pymol

e4d18L1	L:1-292	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d18L2	L:293-364	HTH	HTH	winged
e4d18L3	L:365-406	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN5 C-terminal helix	26S proteasome regulatory subunit RPN5 C-terminal helix

Domains in the same PDB:

e4d18A3	A:77-393	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d18A2	A:394-454	HTH	HTH	winged
e4d18A1	A:455-505	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN7 C-terminal helix	26S proteasome regulatory subunit RPN7 C-terminal helix
e4d18B2	B:30-332	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d18B1	B:333-402	HTH	HTH	winged
e4d18B3	B:403-443	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN9 C-terminal helix	26S proteasome regulatory subunit RPN9 C-terminal helix
e4d18C1	C:3-220	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d18C3	C:221-364	HTH	HTH	winged
e4d18C2	C:365-403	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN3 C-terminal helix	26S proteasome regulatory subunit RPN3 C-terminal helix
e4d18D1	D:1-292	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d18D2	D:293-364	HTH	HTH	winged
e4d18D3	D:365-406	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN5 C-terminal helix	26S proteasome regulatory subunit RPN5 C-terminal helix
e4d18E2	E:24-250	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like
e4d18E1	E:251-333	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain
e4d18F1	F:29-207	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like
e4d18F2	F:208-316	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain
e4d18G3	G:8-86	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d18G2	G:87-164	HTH	HTH	winged
e4d18G1	G:165-215	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN9 C-terminal helix	26S proteasome regulatory subunit RPN9 C-terminal helix
e4d18H2	H:11-114	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d18H1	H:115-167,H:194-209	HTH	HTH	winged
e4d18I3	I:77-393	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d18I2	I:394-454	HTH	HTH	winged
e4d18I1	I:455-505	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN7 C-terminal helix	26S proteasome regulatory subunit RPN7 C-terminal helix
e4d18J2	J:30-332	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d18J1	J:333-402	HTH	HTH	winged
e4d18J3	J:403-443	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN9 C-terminal helix	26S proteasome regulatory subunit RPN9 C-terminal helix
e4d18K1	K:3-220	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d18K3	K:221-364	HTH	HTH	winged
e4d18K2	K:365-403	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN3 C-terminal helix	26S proteasome regulatory subunit RPN3 C-terminal helix
e4d18L1	L:1-292	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d18L2	L:293-364	HTH	HTH	winged
e4d18L3	L:365-406	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN5 C-terminal helix	26S proteasome regulatory subunit RPN5 C-terminal helix
e4d18M2	M:24-250	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like
e4d18M1	M:251-333	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain
e4d18N1	N:29-207	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like
e4d18N2	N:208-316	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain
e4d18O3	O:8-86	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d18O2	O:87-164	HTH	HTH	winged
e4d18O1	O:165-215	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN9 C-terminal helix	26S proteasome regulatory subunit RPN9 C-terminal helix
e4d18P2	P:11-114	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d18P1	P:115-167,P:194-209	HTH	HTH	winged

Structural contacts of domain e4d18L1 of H-group "ARM repeat":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4d10D1	L:X,Y,Z->N:x,y,z	ARM repeat	Interaction Interface Pymol
e4d10D1	L:-Y+1,X-Y+1,Z+1/3->E:x,y,z	ARM repeat	Interaction Interface Pymol
e4d18O2	L:X,Y,Z->O:x,y,z	HTH	Interaction Interface Pymol
e4d18B2	L:x,y,z->B:X,Y,Z	ARM repeat	Interaction Interface Pymol
e4d18G1	L:-Y+1,X-Y+1,Z+1/3->G:x,y,z	26S proteasome regulatory subunit RPN9 C-terminal helix	Interaction Interface Pymol
e4d18A2	L:x,y,z->A:X,Y,Z	HTH	Interaction Interface Pymol
e4d18A2	L:-Y+1,X-Y+1,Z+1/3->F:x,y,z	HTH	Interaction Interface Pymol
e4d18I3	L:X,Y-1,Z->I:x,y,z	ARM repeat	Interaction Interface Pymol