ECOD: domain e4d8pB1

Domain ID e4d8pB1

A: beta sandwiches
X: Immunoglobulin-like beta-sandwich
H: Immunoglobulin-related
T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
F: C1-set

UID:	001386030
Type:	Automatic domain
Parent:	e1k5nB1
Range:	B:93-190
Ligands:	GOL
PDB:	4d8p
PDB Description:	Peptide from Gamma-gliadin,HLA class II histocompatibility antigen, DQ beta 1 chain
UniProt:	Q5Y7D3
Hsap BLAST neighbor:	P01920
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e4d8pB2	B:-29-92	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e4d8pB1	B:93-190	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e4d8pA2	A:1B-81	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e4d8pA1	A:82-182	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4d8pB2	B:-29-92	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e4d8pB1	B:93-190	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4d8pC2	C:0-80	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e4d8pC1	C:81-181	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4d8pD3	D:-29-92	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e4d8pD2	D:93-190	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e4d8pB1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4d8pA1	B:x,y,z->A:X,Y,Z	Immunoglobulin-related	Interaction Interface Pymol
e4d8pA2	B:x,y,z->A:X,Y,Z	MHC antigen-recognition domain	Interaction Interface Pymol
e4d8pA2	B:X,Y,Z->D:x,y,z	MHC antigen-recognition domain	Interaction Interface Pymol
e4d8pA1	B:x,y,z->A:-X+1,Y,-Z+1	Immunoglobulin-related	Interaction Interface Pymol
e4d8pB1	B:x,y,z->B:-X+1,Y,-Z+1	Immunoglobulin-related	Interaction Interface Pymol
e4d8pB1	B:-X+1,Y,-Z+1->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol