| UID: | 001223064 |
|---|---|
| Type: | Automatic domain |
| Parent: | e3pnpA1 |
| Range: | B:2-232 |
| Ligands: | CL GOL SO4 |
| PDB: | 4d98 |
| PDB Description: | Purine nucleoside phosphorylase deoD-type |
| UniProt: | O34925 |
| Species: | Bacillus subtilis |
Structure of domain e4d98B2
Domains in the same chain:
| e4d98B2 | B:2-232 | Phosphorylase/hydrolase-like | Peptidyl-tRNA hydrolase-like | Peptidyl-tRNA hydrolase-like |
Domains in the same PDB:
Structural contacts of domain e4d98B2 of H-group "Peptidyl-tRNA hydrolase-like":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e4d98A2 | B:-Y,X-Y,Z->A:x,y,z | Peptidyl-tRNA hydrolase-like | Interaction Interface Pymol |
| e4d98A2 | B:x,y,z->A:X,Y,Z | Peptidyl-tRNA hydrolase-like | Interaction Interface Pymol |
| e4d98B2 | B:x,y,z->B:X-Y+1/3,-Y+2/3,-Z+2/3 | Peptidyl-tRNA hydrolase-like | Interaction Interface Pymol |
| e4d98B2 | B:X-Y+1/3,-Y+2/3,-Z+2/3->B:x,y,z | Peptidyl-tRNA hydrolase-like | Interaction Interface Pymol |
| e4d98A2 | B:-X+Y-1/3,-X+1/3,Z+1/3->A:x,y,z | Peptidyl-tRNA hydrolase-like | Interaction Interface Pymol |
| e4d98A2 | B:x,y,z->A:-X,-X+Y,-Z+1 | Peptidyl-tRNA hydrolase-like | Interaction Interface Pymol |
| e4d98B2 | B:x,y,z->B:-Y,X-Y,Z | Peptidyl-tRNA hydrolase-like | Interaction Interface Pymol |
| e4d98B2 | B:-Y,X-Y,Z->B:x,y,z | Peptidyl-tRNA hydrolase-like | Interaction Interface Pymol |
| e4d98B2 | B:x,y,z->B:Y,X,-Z+1 | Peptidyl-tRNA hydrolase-like | Interaction Interface Pymol |
| e4d98B2 | B:Y,X,-Z+1->B:x,y,z | Peptidyl-tRNA hydrolase-like | Interaction Interface Pymol |
| e4d98A2 | B:x,y,z->A:-X,-X+Y,-Z | Peptidyl-tRNA hydrolase-like | Interaction Interface Pymol |
