| UID: | 000962011 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1ogwA1 |
| Range: | H:1-74 |
| PDB: | 4ddi |
| PDB Description: | Polyubiquitin-C |
| UniProt: | P0CG48 |
| Hsap BLAST neighbor: | P62979 |
| Species: | Homo sapiens |
Structure of domain e4ddiH1
Domains in the same chain:
| e4ddiH1 | H:1-74 | beta-Grasp | Ubiquitin-related | Ubiquitin-like |
Domains in the same PDB:
| e4ddiA4 | A:-1-1046 | UBC-like | UBC-like | UBC-like |
| e4ddiA5 | A:1047-1271 | Cysteine proteinases-like | Cysteine proteinases | Cysteine proteinases |
| e4ddiB2 | B:-1-1046 | UBC-like | UBC-like | UBC-like |
| e4ddiB1 | B:1047-1271 | Cysteine proteinases-like | Cysteine proteinases | Cysteine proteinases |
| e4ddiC4 | C:-1-1046 | UBC-like | UBC-like | UBC-like |
| e4ddiC5 | C:1047-1271 | Cysteine proteinases-like | Cysteine proteinases | Cysteine proteinases |
| e4ddiD1 | D:1-76 | beta-Grasp | Ubiquitin-related | Ubiquitin-like |
| e4ddiE1 | E:1-76 | beta-Grasp | Ubiquitin-related | Ubiquitin-like |
| e4ddiF1 | F:1-76 | beta-Grasp | Ubiquitin-related | Ubiquitin-like |
| e4ddiG1 | G:1-74 | beta-Grasp | Ubiquitin-related | Ubiquitin-like |
| e4ddiH1 | H:1-74 | beta-Grasp | Ubiquitin-related | Ubiquitin-like |
| e4ddiI1 | I:1-74 | beta-Grasp | Ubiquitin-related | Ubiquitin-like |
Structural contacts of domain e4ddiH1 of H-group "Ubiquitin-related":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e4ddiB1 | H:x,y,z->B:X,Y,Z | Cysteine proteinases | Interaction Interface Pymol |
| e4ddiB2 | H:x,y,z->B:X,Y,Z | UBC-like | Interaction Interface Pymol |
| e4ddiE1 | H:x,y,z->E:X,Y,Z | Ubiquitin-related | Interaction Interface Pymol |
| e4ddiC5 | H:x,y,z->C:X-1/2,Y-1/2,Z | Cysteine proteinases | Interaction Interface Pymol |
