| UID: | 001005572 |
|---|---|
| Type: | Manual and representative domain |
| Range: | A:619-645 |
| Ligands: | ZN |
| PDB: | 4ddt |
| PDB Description: | Reverse gyrase |
| UniProt: | O51934 |
| Species: | Thermotoga maritima |
Structure of domain e4ddtA3
Domains in the same chain:
| e4ddtA2 | A:2-52 | Glucocorticoid receptor-like | LIM domain-like | LIM domain-like |
| e4ddtA7 | A:56-285 | P-loop domains-like | P-loop domains-related | P-loop containing nucleoside triphosphate hydrolases |
| e4ddtA4 | A:282-535 | P-loop domains-like | P-loop domains-related | P-loop containing nucleoside triphosphate hydrolases |
| e4ddtA8 | A:537-621,A:642-712 | HAD domain-like | HAD domain-related | Toprim domain |
| e4ddtA3 | A:619-645 | Rubredoxin-like | Rubredoxin-related | Rubredoxin-related |
| e4ddtA6 | A:714-773,A:1007-1103 | HTH | HTH | winged |
| e4ddtA1 | A:773-812,A:938-1001 | LigT-like | Prokaryotic type I DNA topoisomerase beta-barrel domain | Prokaryotic type I DNA topoisomerase beta-barrel domain |
| e4ddtA5 | A:813-939 | HTH | HTH | winged |
Domains in the same PDB:
| e4ddtA2 | A:2-52 | Glucocorticoid receptor-like | LIM domain-like | LIM domain-like |
| e4ddtA7 | A:56-285 | P-loop domains-like | P-loop domains-related | P-loop containing nucleoside triphosphate hydrolases |
| e4ddtA4 | A:282-535 | P-loop domains-like | P-loop domains-related | P-loop containing nucleoside triphosphate hydrolases |
| e4ddtA8 | A:537-621,A:642-712 | HAD domain-like | HAD domain-related | Toprim domain |
| e4ddtA3 | A:619-645 | Rubredoxin-like | Rubredoxin-related | Rubredoxin-related |
| e4ddtA6 | A:714-773,A:1007-1103 | HTH | HTH | winged |
| e4ddtA1 | A:773-812,A:938-1001 | LigT-like | Prokaryotic type I DNA topoisomerase beta-barrel domain | Prokaryotic type I DNA topoisomerase beta-barrel domain |
| e4ddtA5 | A:813-939 | HTH | HTH | winged |
Structural contacts of domain e4ddtA3 of H-group "Rubredoxin-related":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e4ddtA7 | A:x,y,z->A:-X,Y,-Z-1 | P-loop domains-related | Interaction Interface Pymol |
| e4ddtA7 | A:-X,Y,-Z-1->A:x,y,z | P-loop domains-related | Interaction Interface Pymol |
