Domain ID e4dfjA5

Download files:
  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: Ribonuclease H-like
  • T: Ribonuclease H-like
  • F: Taq-exonuc
UID: 001168741
Type: Automatic domain
Parent: e1qtmA4
Range: A:294-422
Ligands: FMT MG
PDB: 4dfj
PDB Description: DNA POLYMERASE I, THERMOSTABLE
UniProt: P19821
Species: Thermus aquaticus

Structure of domain e4dfjA5

Structural contacts of domain e4dfjA5 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4dfjA6 A:x,y,z->A:Y,X-1,-Z "fingers" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol
e4dfjA7 A:X-Y-1,-Y-1,-Z-1/3->A:x,y,z helical bundle in Bacillus stearothermophilus-like DNA polymerase I Interaction Interface Pymol
e4dfjA8 A:x,y,z->A:-Y,X-Y-1,Z+1/3 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol