ECOD: domain e4dhjE1

Domain ID e4dhjE1

A: a+b complex topology
X: Cysteine proteinases-like
H: Cysteine proteinases
T: Cysteine proteinases
F: Peptidase_C65

UID:	001307638
Type:	Automatic domain
Parent:	e1tffA1
Range:	E:52-275
PDB:	4dhj
PDB Description:	Ubiquitin thioesterase otubain-like
UniProt:	Q9XVR6
Hsap BLAST neighbor:	Q96FW1
Species:	Caenorhabditis elegans

Domains in the same chain:

Download Pymol

e4dhjE1	E:52-275	Cysteine proteinases-like	Cysteine proteinases	Cysteine proteinases

Domains in the same PDB:

e4dhjA1	A:28-275	Cysteine proteinases-like	Cysteine proteinases	Cysteine proteinases
e4dhjB1	B:501-576	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e4dhjC1	C:1-142	UBC-like	UBC-like	UBC-like
e4dhjD1	D:501-573	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e4dhjE1	E:52-275	Cysteine proteinases-like	Cysteine proteinases	Cysteine proteinases
e4dhjF1	F:501-574	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e4dhjG1	G:1-142	UBC-like	UBC-like	UBC-like
e4dhjH1	H:501-574	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e4dhjI1	I:36-276	Cysteine proteinases-like	Cysteine proteinases	Cysteine proteinases
e4dhjJ1	J:501-574	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e4dhjK1	K:1-142	UBC-like	UBC-like	UBC-like
e4dhjL1	L:38-276	Cysteine proteinases-like	Cysteine proteinases	Cysteine proteinases
e4dhjM1	M:501-574	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e4dhjN1	N:1-142	UBC-like	UBC-like	UBC-like

Structural contacts of domain e4dhjE1 of H-group "Cysteine proteinases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4dhjF1	E:X,Y,Z->F:x,y,z	Ubiquitin-related	Interaction Interface Pymol
e4dhjK1	E:-X-1,Y-1/2,-Z+1/2->K:x,y,z	UBC-like	Interaction Interface Pymol
e4dhjH1	E:X,Y,Z->H:x,y,z	Ubiquitin-related	Interaction Interface Pymol
e4dhjG1	E:X,Y,Z->G:x,y,z	UBC-like	Interaction Interface Pymol
e4dhjN1	E:x,y,z->N:X-1,Y,Z	UBC-like	Interaction Interface Pymol
e4dhjF1	E:x,y,z->F:X-1,Y,Z	Ubiquitin-related	Interaction Interface Pymol
e4dhjI1	E:x,y,z->I:-X-3/2,-Y-1,Z-1/2	Cysteine proteinases	Interaction Interface Pymol
e4dhjL1	E:X,Y,Z->L:x,y,z	Cysteine proteinases	Interaction Interface Pymol
e4dhjM1	E:X,Y,Z->M:x,y,z	Ubiquitin-related	Interaction Interface Pymol