Domain ID e4ejbV1

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  • A: beta barrels
  • X: Ribosomal protein L21p
  • H: Ribosomal protein L21p
  • T: Ribosomal protein L21p
  • F: Ribosomal_L21p
UID: 001015919
Type: Automatic domain
Parent: e2j01V1
Range: V:1-101
PDB: 4ejb
PDB Description:
Species:

Structure of domain e4ejbV1

Domains in the same chain:

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e4ejbV1 V:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p

Domains in the same PDB:

e4ejb01 0:1-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4ejb11 1:1-94 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4ejb21 2:1-71 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4ejb31 3:1-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4ejb41 4:36-66 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4ejb51 5:1-59 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4ejb61 6:1-45 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4ejb71 7:1-49 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4ejb81 8:1-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4ejb91 9:1-36 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4ejbC1 C:18-66,C:159-224 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e4ejbC2 C:67-158 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e4ejbD5 D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4ejbD6 D:127-273 SH3 SH3 SH3
e4ejbF1 F:1-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4ejbG1 G:1-181 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4ejbH3 H:12-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4ejbH1 H:83-171 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4ejbI2 I:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4ejbI1 I:54-145 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4ejbN1 N:1-139 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4ejbO1 O:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4ejbR1 R:1-117 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4ejbU1 U:1-117 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4ejbV1 V:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4ejbW1 W:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4ejbX1 X:1-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4ejbY2 Y:2-102 SH3 SH3 SH3
e4ejbZ1 Z:1-91 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4ejbZ2 Z:91-177 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related

Structural contacts of domain e4ejbV1 of H-group "Ribosomal protein L21p":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4ejbU1 V:x,y,z->U:X,Y,Z Ribosomal protein L20 Interaction Interface Pymol
e4ejbN1 V:x,y,z->N:X,Y,Z Ribosomal protein L13 and L16-A Interaction Interface Pymol
e4ejbN1 V:x,y,z->P:X,Y,Z Ribosomal protein L13 and L16-A Interaction Interface Pymol