Domain ID e4ejc62

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  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Rubredoxin-related
  • F: Ribosomal_L33
UID: 001247268
Type: Automatic domain
Parent: e2j0161
Range: 6:9-53
PDB: 4ejc
PDB Description:
Species:

Structure of domain e4ejc62

Domains in the same chain:

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e4ejc62 6:9-53 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Domains in the same PDB:

e4ejc01 0:1-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4ejc11 1:1-94 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4ejc21 2:1-71 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4ejc31 3:1-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4ejc41 4:1-40 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4ejc51 5:1-59 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4ejc62 6:9-53 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4ejc71 7:1-49 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4ejc81 8:1-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4ejc91 9:1-36 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4ejcC1 C:18-66,C:159-224 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e4ejcC2 C:67-158 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e4ejcD5 D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4ejcD6 D:127-273 SH3 SH3 SH3
e4ejcF2 F:6-207 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4ejcG1 G:1-181 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4ejcH4 H:4-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4ejcH3 H:83-171 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4ejcI2 I:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4ejcI1 I:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4ejcN1 N:1-139 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4ejcO1 O:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4ejcR1 R:1-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4ejcU1 U:1-117 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4ejcV1 V:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4ejcW1 W:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4ejcX1 X:1-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4ejcY1 Y:2-103 SH3 SH3 SH3
e4ejcZ1 Z:1-91 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4ejcZ2 Z:91-177 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related

Structural contacts of domain e4ejc62 of H-group "Rubredoxin-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4ejc81 6:X,Y,Z->8:x,y,z Ribosomal protein L35p Interaction Interface Pymol