ECOD: domain e4esvE2

Domain ID e4esvE2

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: DnaB_C

UID:	001386242
Type:	Automatic domain
Parent:	e2r6aB1
Range:	E:154-441
Ligands:	ALF CA GDP
PDB:	4esv
PDB Description:	Replicative helicase
UniProt:	Q9X4C9
Species:	Geobacillus stearothermophilus

Domain
In chain context
In PDB context

Structure of domain e4esvE2

Domains in the same chain:

Download Pymol

e4esvE3	E:13-153	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related
e4esvE2	E:154-441	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e4esvA4	A:6-175	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related
e4esvA3	A:176-441	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4esvB4	B:6-175	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related
e4esvB3	B:176-445	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4esvC1	C:8-159	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related
e4esvC2	C:160-441	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4esvD2	D:8-159	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related
e4esvD1	D:160-441	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4esvE3	E:13-153	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related
e4esvE2	E:154-441	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4esvF2	F:9-175	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related
e4esvF1	F:176-441	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4esvG2	G:8-175	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related
e4esvG1	G:176-441	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4esvH2	H:9-175	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related
e4esvH1	H:176-445	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4esvI2	I:9-175	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related
e4esvI1	I:176-441	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4esvJ3	J:14-153	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related
e4esvJ2	J:154-441	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4esvK2	K:8-175	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related
e4esvK1	K:176-441	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4esvL3	L:10-153	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related
e4esvL2	L:154-441	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e4esvE2 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4esvF1	E:x,y,z->F:X,Y,Z	P-loop domains-related	Interaction Interface Pymol
e4esvD1	E:x,y,z->D:X,Y,Z	P-loop domains-related	Interaction Interface Pymol
e4esvD2	E:x,y,z->D:X,Y,Z	DnaB helicase N-terminal domain-related	Interaction Interface Pymol
e4esvH1	E:x,y,z->H:-X+1,Y,-Z+1/2	P-loop domains-related	Interaction Interface Pymol
e4esvH2	E:x,y,z->H:-X+1,Y,-Z+1/2	DnaB helicase N-terminal domain-related	Interaction Interface Pymol
e4esvI1	E:x,y,z->I:-X+1,Y,-Z+1/2	P-loop domains-related	Interaction Interface Pymol