Domain ID e4fdgE4

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: MCM
UID: 001685654
Type: Automatic domain
Parent: e5bk472
Range: E:265-507
PDB: 4fdg
PDB Description: Minichromosome maintenance protein MCM
UniProt: Q9UXG1
Hsap BLAST neighbor: P33992
Species: Sulfolobus solfataricus

Structure of domain e4fdgE4

Domains in the same chain:

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e4fdgE7 E:7-102 N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54)
e4fdgE2 E:103-135,E:191-264 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4fdgE6 E:136-190 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4fdgE4 E:265-507 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4fdgE5 E:508-598 Histone-like Histone-related AAA+ ATPase lid domain

Domains in the same PDB:

e4fdgA7 A:7-102 N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54)
e4fdgA2 A:103-135,A:191-264 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4fdgA6 A:136-190 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4fdgA4 A:265-507 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4fdgA5 A:508-598 Histone-like Histone-related AAA+ ATPase lid domain
e4fdgB4 B:7-102 N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54)
e4fdgB3 B:103-135,B:191-264 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4fdgB1 B:136-190 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4fdgB5 B:265-507 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4fdgB6 B:508-598 Histone-like Histone-related AAA+ ATPase lid domain
e4fdgC7 C:7-102 N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54)
e4fdgC2 C:103-135,C:191-264 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4fdgC6 C:136-190 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4fdgC4 C:265-507 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4fdgC5 C:508-598 Histone-like Histone-related AAA+ ATPase lid domain
e4fdgD7 D:7-102 N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54)
e4fdgD2 D:103-135,D:191-264 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4fdgD6 D:136-190 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4fdgD4 D:265-507 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4fdgD5 D:508-598 Histone-like Histone-related AAA+ ATPase lid domain
e4fdgE7 E:7-102 N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54)
e4fdgE2 E:103-135,E:191-264 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4fdgE6 E:136-190 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4fdgE4 E:265-507 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4fdgE5 E:508-598 Histone-like Histone-related AAA+ ATPase lid domain

Structural contacts of domain e4fdgE4 of H-group "P-loop domains-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4fdgD5 E:-X+1,Y-1/2,-Z+1->D:x,y,z Histone-related Interaction Interface Pymol
e4fdgD4 E:-X+1,Y-1/2,-Z+1->D:x,y,z P-loop domains-related Interaction Interface Pymol
e4fdgC4 E:x,y,z->C:X,Y,Z P-loop domains-related Interaction Interface Pymol
e4fdgC2 E:x,y,z->C:X,Y,Z Nucleic acid-binding proteins Interaction Interface Pymol
e4fdgE7 E:x,y,z->E:-X+2,Y-1/2,-Z+1 N-terminal subdomain in DNA replication initiator (cdc21/cdc54) Interaction Interface Pymol