ECOD: domain e4fmbB1

Domain ID e4fmbB1

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: Ras

UID:	000152413
Type:	Automatic domain
Parent:	e1mh1A1
Range:	B:6-176
Ligands:	AF3 GDP MG
PDB:	4fmb
PDB Description:	RAS-RELATED PROTEIN RAB-1A
UniProt:	P62820
Hsap BLAST neighbor:	P62820
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e4fmbB1	B:6-176	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e4fmbA1	A:40-127	LEE-encoded effector EspG N-terminal domain-related	LEE-encoded effector EspG N-terminal domain-related	LEE-encoded effector EspG N-terminal domain-related
e4fmbA2	A:128-400	LEE-encoded effector EspG C-terminal domain-related	LEE-encoded effector EspG C-terminal domain-related	LEE-encoded effector EspG C-terminal domain-related
e4fmbB1	B:6-176	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4fmbC1	C:40-127	LEE-encoded effector EspG N-terminal domain-related	LEE-encoded effector EspG N-terminal domain-related	LEE-encoded effector EspG N-terminal domain-related
e4fmbC2	C:128-400	LEE-encoded effector EspG C-terminal domain-related	LEE-encoded effector EspG C-terminal domain-related	LEE-encoded effector EspG C-terminal domain-related
e4fmbD1	D:6-166	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4fmbE1	E:40-127	LEE-encoded effector EspG N-terminal domain-related	LEE-encoded effector EspG N-terminal domain-related	LEE-encoded effector EspG N-terminal domain-related
e4fmbE2	E:128-400	LEE-encoded effector EspG C-terminal domain-related	LEE-encoded effector EspG C-terminal domain-related	LEE-encoded effector EspG C-terminal domain-related
e4fmbF1	F:6-166	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e4fmbB1 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4fmbA2	B:x,y,z->A:X,Y,Z	LEE-encoded effector EspG C-terminal domain-related	Interaction Interface Pymol
e4fmbD1	B:x,y,z->D:-X-1/2,Y-1/2,-Z+1	P-loop domains-related	Interaction Interface Pymol
e4fmbA2	B:x,y,z->A:-X,Y,-Z+1	LEE-encoded effector EspG C-terminal domain-related	Interaction Interface Pymol
e4fmbA1	B:x,y,z->A:-X,Y,-Z+1	LEE-encoded effector EspG N-terminal domain-related	Interaction Interface Pymol