Domain ID e4fmbE2

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  • A: a+b two layers
  • X: LEE-encoded effector EspG C-terminal domain-related
  • H: LEE-encoded effector EspG C-terminal domain-related
  • T: LEE-encoded effector EspG C-terminal domain-related
  • F: EspG
UID: 001108929
Type: Automatic domain
Parent: e3eb8A2
Range: E:128-400
Ligands: AF3 GDP
PDB: 4fmb
PDB Description: CYSTEINE PROTEASE-LIKE VIRA
UniProt: Q7BU69
Species: Shigella flexneri

Structure of domain e4fmbE2

Domains in the same chain:

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e4fmbE1 E:40-127 LEE-encoded effector EspG N-terminal domain-related LEE-encoded effector EspG N-terminal domain-related LEE-encoded effector EspG N-terminal domain-related
e4fmbE2 E:128-400 LEE-encoded effector EspG C-terminal domain-related LEE-encoded effector EspG C-terminal domain-related LEE-encoded effector EspG C-terminal domain-related

Domains in the same PDB:

e4fmbA1 A:40-127 LEE-encoded effector EspG N-terminal domain-related LEE-encoded effector EspG N-terminal domain-related LEE-encoded effector EspG N-terminal domain-related
e4fmbA2 A:128-400 LEE-encoded effector EspG C-terminal domain-related LEE-encoded effector EspG C-terminal domain-related LEE-encoded effector EspG C-terminal domain-related
e4fmbB1 B:6-176 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4fmbC1 C:40-127 LEE-encoded effector EspG N-terminal domain-related LEE-encoded effector EspG N-terminal domain-related LEE-encoded effector EspG N-terminal domain-related
e4fmbC2 C:128-400 LEE-encoded effector EspG C-terminal domain-related LEE-encoded effector EspG C-terminal domain-related LEE-encoded effector EspG C-terminal domain-related
e4fmbD1 D:6-166 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4fmbE1 E:40-127 LEE-encoded effector EspG N-terminal domain-related LEE-encoded effector EspG N-terminal domain-related LEE-encoded effector EspG N-terminal domain-related
e4fmbE2 E:128-400 LEE-encoded effector EspG C-terminal domain-related LEE-encoded effector EspG C-terminal domain-related LEE-encoded effector EspG C-terminal domain-related
e4fmbF1 F:6-166 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e4fmbE2 of H-group "LEE-encoded effector EspG C-terminal domain-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4fmbF1 E:X,Y,Z->F:x,y,z P-loop domains-related Interaction Interface Pymol
e4fmbA2 E:-X-1/2,Y-1/2,-Z->A:x,y,z LEE-encoded effector EspG C-terminal domain-related Interaction Interface Pymol
e4fmbA2 E:x,y,z->A:X,Y,Z LEE-encoded effector EspG C-terminal domain-related Interaction Interface Pymol
e4fmbC2 E:x,y,z->C:X,Y,Z LEE-encoded effector EspG C-terminal domain-related Interaction Interface Pymol
e4fmbD1 E:x,y,z->D:-X-1/2,Y-1/2,-Z P-loop domains-related Interaction Interface Pymol