ECOD: domain e4fz2A4

Domain ID e4fz2A4

A: a/b three-layered sandwiches
X: Restriction endonuclease-like
H: tRNA-intron endonuclease catalytic domain-like
T: tRNA-intron endonuclease catalytic domain-like
F: tRNA_int_endo

UID:	000152526
Type:	Automatic domain
Parent:	e1a79A2
Range:	A:79-102,A:299-377
PDB:	4fz2
PDB Description:	tRNA intron endonuclease
UniProt:	C7DIA5
Species:

Domains in the same chain:

Download Pymol

e4fz2A1	A:2-78	Homing endonucleases-like	tRNA-intron endonuclease N-terminal domain-like	tRNA-intron endonuclease N-terminal domain-like
e4fz2A4	A:79-102,A:299-377	Restriction endonuclease-like	tRNA-intron endonuclease catalytic domain-like	tRNA-intron endonuclease catalytic domain-like
e4fz2A2	A:103-205	Homing endonucleases-like	tRNA-intron endonuclease N-terminal domain-like	tRNA-intron endonuclease N-terminal domain-like
e4fz2A3	A:206-290,A:378-387	Restriction endonuclease-like	tRNA-intron endonuclease catalytic domain-like	tRNA-intron endonuclease catalytic domain-like

Domains in the same PDB:

e4fz2A1	A:2-78	Homing endonucleases-like	tRNA-intron endonuclease N-terminal domain-like	tRNA-intron endonuclease N-terminal domain-like
e4fz2A4	A:79-102,A:299-377	Restriction endonuclease-like	tRNA-intron endonuclease catalytic domain-like	tRNA-intron endonuclease catalytic domain-like
e4fz2A2	A:103-205	Homing endonucleases-like	tRNA-intron endonuclease N-terminal domain-like	tRNA-intron endonuclease N-terminal domain-like
e4fz2A3	A:206-290,A:378-387	Restriction endonuclease-like	tRNA-intron endonuclease catalytic domain-like	tRNA-intron endonuclease catalytic domain-like
e4fz2B1	B:1-77	Homing endonucleases-like	tRNA-intron endonuclease N-terminal domain-like	tRNA-intron endonuclease N-terminal domain-like
e4fz2B4	B:78-101,B:298-376	Restriction endonuclease-like	tRNA-intron endonuclease catalytic domain-like	tRNA-intron endonuclease catalytic domain-like
e4fz2B2	B:102-204	Homing endonucleases-like	tRNA-intron endonuclease N-terminal domain-like	tRNA-intron endonuclease N-terminal domain-like
e4fz2B3	B:205-289,B:377-386	Restriction endonuclease-like	tRNA-intron endonuclease catalytic domain-like	tRNA-intron endonuclease catalytic domain-like

Structural contacts of domain e4fz2A4 of H-group "tRNA-intron endonuclease catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4fz2B2	A:X,Y,Z->B:x,y,z	tRNA-intron endonuclease N-terminal domain-like	Interaction Interface Pymol
e4fz2B3	A:X,Y,Z->B:x,y,z	tRNA-intron endonuclease catalytic domain-like	Interaction Interface Pymol
e4fz2B2	A:-Y-1,X-Y,Z-1/3->B:x,y,z	tRNA-intron endonuclease N-terminal domain-like	Interaction Interface Pymol
e4fz2A1	A:-Y-1,X-Y,Z-1/3->A:x,y,z	tRNA-intron endonuclease N-terminal domain-like	Interaction Interface Pymol