Domain ID e4fz2B4

Download files:
  • A: a/b three-layered sandwiches
  • X: Restriction endonuclease-like
  • H: tRNA-intron endonuclease catalytic domain-like
  • T: tRNA-intron endonuclease catalytic domain-like
  • F: tRNA_int_endo
UID: 000989814
Type: Automatic domain
Parent: e1a79A2
Range: B:78-101,B:298-376
PDB: 4fz2
PDB Description: tRNA intron endonuclease
UniProt: C7DIA5
Species:

Structure of domain e4fz2B4

Domains in the same chain:

Download Pymol

e4fz2B1 B:1-77 Homing endonucleases-like tRNA-intron endonuclease N-terminal domain-like tRNA-intron endonuclease N-terminal domain-like
e4fz2B4 B:78-101,B:298-376 Restriction endonuclease-like tRNA-intron endonuclease catalytic domain-like tRNA-intron endonuclease catalytic domain-like
e4fz2B2 B:102-204 Homing endonucleases-like tRNA-intron endonuclease N-terminal domain-like tRNA-intron endonuclease N-terminal domain-like
e4fz2B3 B:205-289,B:377-386 Restriction endonuclease-like tRNA-intron endonuclease catalytic domain-like tRNA-intron endonuclease catalytic domain-like

Domains in the same PDB:

e4fz2A1 A:2-78 Homing endonucleases-like tRNA-intron endonuclease N-terminal domain-like tRNA-intron endonuclease N-terminal domain-like
e4fz2A4 A:79-102,A:299-377 Restriction endonuclease-like tRNA-intron endonuclease catalytic domain-like tRNA-intron endonuclease catalytic domain-like
e4fz2A2 A:103-205 Homing endonucleases-like tRNA-intron endonuclease N-terminal domain-like tRNA-intron endonuclease N-terminal domain-like
e4fz2A3 A:206-290,A:378-387 Restriction endonuclease-like tRNA-intron endonuclease catalytic domain-like tRNA-intron endonuclease catalytic domain-like
e4fz2B1 B:1-77 Homing endonucleases-like tRNA-intron endonuclease N-terminal domain-like tRNA-intron endonuclease N-terminal domain-like
e4fz2B4 B:78-101,B:298-376 Restriction endonuclease-like tRNA-intron endonuclease catalytic domain-like tRNA-intron endonuclease catalytic domain-like
e4fz2B2 B:102-204 Homing endonucleases-like tRNA-intron endonuclease N-terminal domain-like tRNA-intron endonuclease N-terminal domain-like
e4fz2B3 B:205-289,B:377-386 Restriction endonuclease-like tRNA-intron endonuclease catalytic domain-like tRNA-intron endonuclease catalytic domain-like

Structural contacts of domain e4fz2B4 of H-group "tRNA-intron endonuclease catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4fz2A2 B:x,y,z->A:X,Y,Z tRNA-intron endonuclease N-terminal domain-like Interaction Interface Pymol
e4fz2A3 B:x,y,z->A:X,Y,Z tRNA-intron endonuclease catalytic domain-like Interaction Interface Pymol
e4fz2A2 B:x,y,z->A:-Y,X-Y,Z-1/3 tRNA-intron endonuclease N-terminal domain-like Interaction Interface Pymol