Domain ID e4g5mN2

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  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: Ribonuclease H-like
  • T: Ribonuclease H-like
  • F: Ribosomal_S11
UID: 001149861
Type: Automatic domain
Parent: e2uubK1
Range: N:11-129
Ligands: MG
PDB: 4g5m
PDB Description:
Hsap BLAST neighbor: P82912
Species:

Structure of domain e4g5mN2

Domains in the same chain:

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e4g5mN2 N:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like

Domains in the same PDB:

e4g5mF2 F:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4g5mF1 F:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4g5mH4 H:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4g5mH3 H:73-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4g5mI1 I:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4g5mJ1 J:1-154 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4g5mK1 K:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4g5mK2 K:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4g5mM1 M:1-96 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4g5mN2 N:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4g5mO1 O:4-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4g5mQ1 Q:1-59 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4g5mR2 R:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4g5mS1 S:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4g5mU2 U:17-88 HTH HTH tri-helical
e4g5mW1 W:1-92 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e4g5mN2 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4g5mU2 N:X,Y,Z->U:x,y,z HTH Interaction Interface Pymol
e4g5mJ1 N:x,y,z->J:X,Y,Z Ribosomal protein S7 Interaction Interface Pymol