Domain ID e4g5n62

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  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Rubredoxin-related
  • F: Ribosomal_L33
UID: 001170997
Type: Automatic domain
Parent: e2j0161
Range: 6:9-53
PDB: 4g5n
PDB Description:
Species:

Structure of domain e4g5n62

Domains in the same chain:

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e4g5n62 6:9-53 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Domains in the same PDB:

e4g5n01 0:1-117 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4g5n11 1:1-115 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4g5n21 2:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4g5n31 3:9-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4g5n42 4:1-63 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4g5n51 5:1-58 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4g5n62 6:9-53 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4g5n71 7:1-49 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4g5n81 8:1-61 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4g5nD5 D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4g5nD6 D:127-273 SH3 SH3 SH3
e4g5nF1 F:1-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4g5nG1 G:1-180 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4g5nH4 H:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4g5nH3 H:83-171 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4g5nK2 K:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4g5nK1 K:54-145 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4g5nM1 M:1-138 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4g5nN1 N:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4g5nS1 S:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4g5nT1 T:1-92 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4g5nU2 U:2-103 SH3 SH3 SH3
e4g5nV1 V:1-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4g5nV2 V:93-179 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e4g5nW1 W:4-72 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4g5nX1 X:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4g5nZ1 Z:1-96 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28

Structural contacts of domain e4g5n62 of H-group "Rubredoxin-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4g5n81 6:X,Y,Z->8:x,y,z Ribosomal protein L35p Interaction Interface Pymol