Domain ID e4gasE3

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  • A: a+b two layers
  • X: Ribosomal protein S5 domain 2-like
  • H: Ribosomal protein S5 domain 2-like
  • T: Ribosomal protein S5 domain 2-like
  • F: Ribosomal_S5_C
UID: 001179018
Type: Automatic domain
Parent: e1pkpA2
Range: E:78-159
PDB: 4gas
PDB Description:
Species:

Structure of domain e4gasE3

Domains in the same chain:

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e4gasE4 E:10-77 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4gasE3 E:78-159 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e4gasC2 C:1-105 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4gasC1 C:106-206 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4gasE4 E:10-77 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4gasE3 E:78-159 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4gasF2 F:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4gasG1 G:1-151 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4gasH1 H:1-64 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4gasH2 H:65-129 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4gasJ1 J:1-103 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4gasK1 K:1-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4gasL1 L:1-123 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4gasN1 N:0-96 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4gasO1 O:1-88 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4gasP1 P:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4gasR1 R:1-55 HTH HTH tri-helical
e4gasT1 T:1-85 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4gasY2 Y:1-183 RRF/tRNA synthetase additional domain-like Ribosome recycling factor, RRF Ribosome recycling factor, RRF

Structural contacts of domain e4gasE3 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4gasH1 E:X,Y,Z->H:x,y,z Ribosomal protein S8, N-terminal domain Interaction Interface Pymol
e4gasH2 E:X,Y,Z->H:x,y,z Ribosomal protein S8, C-terminal domain Interaction Interface Pymol