ECOD: domain e4hv4B5

Domain ID e4hv4B5

A: a/b three-layered sandwiches
X: MurD-like peptide ligases, peptide-binding domain
H: MurD-like peptide ligases, peptide-binding domain
T: MurD-like peptide ligases, peptide-binding domain
F: Mur_ligase_C

UID:	001176254
Type:	Automatic domain
Parent:	e1e8cA2
Range:	B:323-483
Ligands:	AMP BME
PDB:	4hv4
PDB Description:	UDP-N-acetylmuramate--L-alanine ligase
UniProt:	Q8ZIE8
Species:

Domain
In chain context
In PDB context

Structure of domain e4hv4B5

Domains in the same chain:

Download Pymol

e4hv4B6	B:15-107	Rossmann-like	Rossmann-related	MurCD/PglD N-terminal domain-like
e4hv4B4	B:108-322	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4hv4B5	B:323-483	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain

Domains in the same PDB:

e4hv4A6	A:19-107	Rossmann-like	Rossmann-related	MurCD/PglD N-terminal domain-like
e4hv4A4	A:108-322	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4hv4A5	A:323-483	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain
e4hv4B6	B:15-107	Rossmann-like	Rossmann-related	MurCD/PglD N-terminal domain-like
e4hv4B4	B:108-322	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4hv4B5	B:323-483	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain

Structural contacts of domain e4hv4B5 of H-group "MurD-like peptide ligases, peptide-binding domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4hv4A5	B:x,y,z->A:X,Y,Z	MurD-like peptide ligases, peptide-binding domain	Interaction Interface Pymol
e4hv4A6	B:-X,Y-1/2,-Z+1/2->A:x,y,z	Rossmann-related	Interaction Interface Pymol
e4hv4A4	B:X,Y-1,Z->A:x,y,z	P-loop domains-related	Interaction Interface Pymol
e4hv4A5	B:x,y,z->A:X-1/2,-Y+3/2,-Z	MurD-like peptide ligases, peptide-binding domain	Interaction Interface Pymol