Domain ID e4ii2A5

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: Activating enzymes of the ubiquitin-like proteins
  • F: UBA_E1_SCCH
UID: 001835401
Type: Automatic domain
Parent: e8se9A2
Range: A:399-763,A:787-902
Ligands: ATP EDO MG PG0 SO4
PDB: 4ii2
PDB Description: Ubiquitin-activating enzyme E1 1
UniProt: O94609
Hsap BLAST neighbor: P22314
Species:

Structure of domain e4ii2A5

Structural contacts of domain e4ii2A5 of H-group "Rossmann-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4ii2B1 A:X,Y,Z->B:x,y,z Ubiquitin-related Interaction Interface Pymol
e4ii2C1 A:X,Y,Z->C:x,y,z UBC-like Interaction Interface Pymol
e4ii2A3 A:x,y,z->A:-X,Y-1/2,-Z+1/2 RIFT-related Interaction Interface Pymol
e4ii2A5 A:x,y,z->A:-X,Y-1/2,-Z+1/2 Rossmann-related Interaction Interface Pymol
e4ii2A4 A:-X,Y-1/2,-Z+1/2->A:x,y,z Rossmann-related Interaction Interface Pymol
e4ii2A5 A:-X,Y-1/2,-Z+1/2->A:x,y,z Rossmann-related Interaction Interface Pymol
e4ii2B1 A:x,y,z->B:-X-1,Y-1/2,-Z+1/2 Ubiquitin-related Interaction Interface Pymol
e4ii2A2 A:X-1/2,-Y-1/2,-Z->A:x,y,z E2-binding domain of E1 Interaction Interface Pymol