ECOD: domain e4imaB2

Domain ID e4imaB2

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: PK beta-barrel domain-like
F: PK

UID:	001516817
Type:	Automatic domain
Parent:	e2g50A1
Range:	B:129-230
PDB:	4ima
PDB Description:	PYRUVATE KINASE
UniProt:	P30613
Hsap BLAST neighbor:	P30613
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e4imaB2

Domains in the same chain:

Download Pymol

e4imaB1	B:19-128,B:231-408	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e4imaB2	B:129-230	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e4imaB3	B:409-543	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like

Domains in the same PDB:

e4imaA2	A:16-128,A:231-408	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e4imaA1	A:129-230	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e4imaA3	A:409-543	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like
e4imaB1	B:19-128,B:231-408	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e4imaB2	B:129-230	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e4imaB3	B:409-543	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like
e4imaC2	C:18-128,C:231-408	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e4imaC1	C:129-230	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e4imaC3	C:409-543	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like
e4imaD1	D:15-128,D:231-408	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e4imaD4	D:129-147,D:172-230	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e4imaD2	D:409-542	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like

Structural contacts of domain e4imaB2 of H-group "RIFT-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4imaD1	B:X,Y,Z->D:x,y,z	TIM barrels	Interaction Interface Pymol
e4imaC2	B:x,y,z->C:X-1,Y,Z	TIM barrels	Interaction Interface Pymol