ECOD: domain e4ioaV1

Domain ID e4ioaV1

A: alpha bundles
X: Long alpha-hairpin
H: Ribosomal protein L29 (L29p)
T: Ribosomal protein L29 (L29p)
F: Ribosomal_L29

UID:	000989295
Type:	Automatic domain
Parent:	e1vqoV1
Range:	V:1-66
PDB:	4ioa
PDB Description:	50S RIBOSOMAL PROTEIN L29
UniProt:	Q9RXJ4
Species:	Deinococcus radiodurans

Domains in the same chain:

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e4ioaV1	V:1-66	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)

Domains in the same PDB:

e4ioa11	1:5-54	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4ioa21	2:1-46	50S ribosomal protein L34	50S ribosomal protein L34	50S ribosomal protein L34
e4ioa31	3:1-63	Ribosomal protein L35p	Ribosomal protein L35p	Ribosomal protein L35p
e4ioa41	4:1-36	Ribosomal protein L36	Ribosomal protein L36	Ribosomal protein L36
e4ioaA1	A:33-127	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4ioaA3	A:128-272	SH3	SH3	SH3
e4ioaB1	B:1-205	cradle loop barrel	RIFT-related	Alanine racemase-C
e4ioaC2	C:2-198	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e4ioaD1	D:1-177	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e4ioaE4	E:5-82	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e4ioaE3	E:83-175	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e4ioaF1	F:74-144	HTH	HTH	Ribosomal protein L11, C-terminal domain
e4ioaG2	G:30-171	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e4ioaH1	H:1-134	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e4ioaI1	I:4-144	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e4ioaJ1	J:6-141	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e4ioaK1	K:1-113	Enolase-N/ribosomal protein	Prokaryotic ribosomal protein L17	Prokaryotic ribosomal protein L17
e4ioaL1	L:8-111	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4ioaM1	M:2-109	SH3	SH3	SH3
e4ioaN1	N:1-117	PABP domain-like	Ribosomal protein L20	Ribosomal protein L20
e4ioaO1	O:1-94	Ribosomal protein L21p	Ribosomal protein L21p	Ribosomal protein L21p
e4ioaP1	P:1-127	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e4ioaQ1	Q:1-93	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4ioaR2	R:4-113	SH3	SH3	SH3
e4ioaS1	S:1-88	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e4ioaS2	S:89-175	Ribosomal protein TL5/L25 C-terminal domain-like	Ribosomal protein TL5/L25 C-terminal domain-related	Ribosomal protein TL5/L25 C-terminal domain-related
e4ioaT1	T:1-84	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal L27 protein
e4ioaU1	U:1-72	Ribosomal protein bL28-related	Ribosomal protein bL28-related	Ribosomal protein L28
e4ioaV1	V:1-66	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e4ioaW1	W:1-55	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e4ioaZ1	Z:1-58	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related

Structural contacts of domain e4ioaV1 of H-group "Ribosomal protein L29 (L29p)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4ioaQ1	V:x,y,z->Q:X,Y,Z	Ribosomal proteins S24e, L23 and L15e	Interaction Interface Pymol