ECOD: domain e4iqrF2

Domain ID e4iqrF2

A: few secondary structure elements
X: Glucocorticoid receptor-like
H: LIM domain-like
T: LIM domain-like
F: zf-C4

UID:	000223643
Type:	Automatic domain
Parent:	e1dszA1
Range:	F:49-126
Ligands:	ZN
PDB:	4iqr
PDB Description:	HEPATOCYTE NUCLEAR FACTOR 4-ALPHA
UniProt:	P41235
Hsap BLAST neighbor:	P41235
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e4iqrF2

Domains in the same chain:

Download Pymol

e4iqrF2	F:49-126	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4iqrF1	F:127-368	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain

Domains in the same PDB:

e4iqrA6	A:49-124	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4iqrA5	A:138-368	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain
e4iqrB4	B:49-126	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4iqrB3	B:127-368	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain
e4iqrE2	E:49-123	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4iqrE1	E:141-368	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain
e4iqrF2	F:49-126	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4iqrF1	F:127-368	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain

Structural contacts of domain e4iqrF2 of H-group "LIM domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4iqrE2	F:x,y,z->E:X,Y,Z	LIM domain-like	Interaction Interface Pymol
e4iqrB4	F:-X+2,Y-1/2,-Z+1->B:x,y,z	LIM domain-like	Interaction Interface Pymol