ECOD: domain e4jdzA9

Domain ID e4jdzA9

A: beta sandwiches
X: Immunoglobulin-like beta-sandwich
H: Immunoglobulin-related
T: Prealbumin-like
F: SdrD_B

UID:	001277174
Type:	Automatic and representative domain
Parent:	e1vlfN1
Range:	A:558-673
Ligands:	CA
PDB:	4jdz
PDB Description:	Ser-Asp rich fibrinogen/bone sialoprotein-binding protein SdrD
UniProt:	E5QTK7
Species:

Domains in the same chain:

Download Pymol

e4jdzA7	A:236-385	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e4jdzA8	A:386-550G	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e4jdzA9	A:558-673	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Prealbumin-like

Domains in the same PDB:

e4jdzA7	A:236-385	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e4jdzA8	A:386-550G	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e4jdzA9	A:558-673	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Prealbumin-like
e4jdzB4	B:235-386	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e4jdzB5	B:387-559	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e4jdzB3	B:560-680	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Prealbumin-like

Structural contacts of domain e4jdzA9 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4jdzA7	A:x,y,z->A:-X+1,Y-1/2,-Z	Immunoglobulin-related	Interaction Interface Pymol
e4jdzA8	A:-X+1,Y-1/2,-Z->A:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e4jdzB5	A:-X+1,Y-1/2,-Z->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e4jdzB3	A:-X+1,Y-1/2,-Z->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e4jdzB4	A:X-1,Y,Z->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e4jdzB3	A:x,y,z->B:-X+1,Y-1/2,-Z	Immunoglobulin-related	Interaction Interface Pymol