ECOD: domain e4jdzB5

Domain ID e4jdzB5

A: beta sandwiches
X: Immunoglobulin-like beta-sandwich
H: Immunoglobulin-related
T: Common fold of diphtheria toxin/transcription factors/cytochrome f
F: SdrG_C_C

UID:	001178972
Type:	Automatic domain
Parent:	e1n67A2
Range:	B:387-559
PDB:	4jdz
PDB Description:	Ser-Asp rich fibrinogen/bone sialoprotein-binding protein SdrD
UniProt:	E5QTK7
Species:

Domains in the same chain:

Download Pymol

e4jdzB4	B:235-386	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e4jdzB5	B:387-559	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e4jdzB3	B:560-680	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Prealbumin-like

Domains in the same PDB:

e4jdzA7	A:236-385	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e4jdzA8	A:386-550G	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e4jdzA9	A:558-673	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Prealbumin-like
e4jdzB4	B:235-386	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e4jdzB5	B:387-559	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e4jdzB3	B:560-680	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Prealbumin-like

Structural contacts of domain e4jdzB5 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4jdzB4	B:x,y,z->B:-X,Y-1/2,-Z+1	Immunoglobulin-related	Interaction Interface Pymol
e4jdzB5	B:x,y,z->B:-X,Y-1/2,-Z+1	Immunoglobulin-related	Interaction Interface Pymol
e4jdzB5	B:-X,Y-1/2,-Z+1->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e4jdzA8	B:X,Y,Z->A:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e4jdzA9	B:x,y,z->A:-X+1,Y-1/2,-Z	Immunoglobulin-related	Interaction Interface Pymol
e4jdzA8	B:x,y,z->A:X-1,Y,Z	Immunoglobulin-related	Interaction Interface Pymol