Domain ID e4jm2E2

Download files:
  • A: a+b two layers
  • X: Ribosomal protein L31e-like
  • H: Ribosomal protein L31e/gp120 outer domain
  • T: Ribosomal protein L31e/gp120 outer domain
  • F: GP120
UID: 001829556
Type: Automatic domain
Parent: e2nxyA2
Range: E:256-473
Ligands: NAG
PDB: 4jm2
PDB Description: GP120
UniProt: Q75760
Species: Human immunodeficiency virus 1

Structure of domain e4jm2E2

Domains in the same chain:

Download Pymol

e4jm2E1 E:89-255,E:474-491 gp120 inner domain gp120 inner domain gp120 inner domain
e4jm2E2 E:256-473 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain

Domains in the same PDB:

e4jm2A2 A:1-113 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4jm2A3 A:114-214 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4jm2B1 B:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4jm2B2 B:108-214 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4jm2C1 C:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4jm2C2 C:108-212 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4jm2D1 D:1-113 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4jm2D2 D:114-214 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4jm2E1 E:89-255,E:474-491 gp120 inner domain gp120 inner domain gp120 inner domain
e4jm2E2 E:256-473 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e4jm2F1 F:1-97 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4jm2F2 F:98-175 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e4jm2E2 of H-group "Ribosomal protein L31e/gp120 outer domain":

Sorry, the images are being generated.

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4jm2F1 E:x,y,z->F:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e4jm2D1 E:x,y,z->D:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e4jm2A2 E:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e4jm2F2 E:x,y,z->F:-X+1/2,Y-1/2,-Z+2 Immunoglobulin-related Interaction Interface Pymol
e4jm2B1 E:x,y,z->B:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e4jm2F2 E:x,y,z->F:-X+1/2,Y-1/2,-Z+1 Immunoglobulin-related Interaction Interface Pymol