Domain ID e4k0lH2

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  • A: a+b two layers
  • X: Ribosomal protein S8, C-terminal domain
  • H: Ribosomal protein S8, C-terminal domain
  • T: Ribosomal protein S8, C-terminal domain
  • F: Ribosomal_S8
UID: 001064867
Type: Automatic domain
Parent: e1seiA2
Range: H:67-138
PDB: 4k0l
PDB Description:
Species:

Structure of domain e4k0lH2

Domains in the same chain:

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e4k0lH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4k0lH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain

Domains in the same PDB:

e4k0lC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4k0lC1 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4k0lE2 E:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4k0lE1 E:74-154 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4k0lF1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4k0lG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4k0lH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4k0lH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4k0lJ1 J:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4k0lK1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4k0lL1 L:5-128 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4k0lN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4k0lO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4k0lP1 P:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4k0lR1 R:19-88 HTH HTH tri-helical
e4k0lT1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e4k0lH2 of H-group "Ribosomal protein S8, C-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4k0lE1 H:x,y,z->E:X,Y,Z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e4k0lL1 H:X,Y,Z->L:x,y,z Nucleic acid-binding proteins Interaction Interface Pymol