Domain ID e4k0mN1

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  • A: a/b three-layered sandwiches
  • X: Ribosomal protein L13/L15p/L18e/L32e
  • H: Ribosomal protein L13 and L16-A
  • T: Ribosomal protein L13 and L16-A
  • F: Ribosomal_L13
UID: 001064890
Type: Automatic domain
Parent: e4v19N1
Range: N:1-138
PDB: 4k0m
PDB Description:
Hsap BLAST neighbor: Q9BYD1
Species:

Structure of domain e4k0mN1

Domains in the same chain:

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e4k0mN1 N:1-138 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A

Domains in the same PDB:

e4k0m01 0:2-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4k0m11 1:3-95 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4k0m21 2:2-72 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4k0m31 3:1-59 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4k0m41 4:36-65 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4k0m51 5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4k0m61 6:9-52 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4k0m71 7:1-48 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4k0m81 8:2-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4k0m91 9:2-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4k0mD1 D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4k0mD2 D:127-272 SH3 SH3 SH3
e4k0mF1 F:1-207 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4k0mG1 G:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4k0mH1 H:12-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4k0mH2 H:83-170 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4k0mI1 I:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4k0mI2 I:54-145 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4k0mN1 N:1-138 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4k0mO1 O:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4k0mR1 R:2-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4k0mU1 U:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4k0mV1 V:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4k0mW1 W:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4k0mX1 X:3-94 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4k0mY1 Y:2-101 SH3 SH3 SH3
e4k0mZ1 Z:3-90 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4k0mZ2 Z:91-178 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related

Structural contacts of domain e4k0mN1 of H-group "Ribosomal protein L13 and L16-A":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4k0mU1 N:X,Y,Z->U:x,y,z Ribosomal protein L20 Interaction Interface Pymol
e4k0mU1 N:x,y,z->E:X,Y,Z Ribosomal protein L20 Interaction Interface Pymol
e4k0mV1 N:X,Y,Z->V:x,y,z Ribosomal protein L21p Interaction Interface Pymol