Domain ID e4k9oC1

Download files:
  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: DHS-like NAD/FAD-binding domain
  • F: TPP_enzyme_M
UID: 001013051
Type: Automatic domain
Parent: e2ez9A1
Range: C:182-341
Ligands: GOL
PDB: 4k9o
PDB Description: BENZOYLFORMATE DECARBOXYLASE
UniProt: P20906
Species: Pseudomonas putida

Structure of domain e4k9oC1

Domains in the same chain:

e4k9oC3 C:2-181 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4k9oC1 C:182-341 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e4k9oC2 C:342-525 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Domains in the same PDB:

e4k9oA2 A:2-181 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4k9oA1 A:182-341 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e4k9oA3 A:342-526 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4k9oB3 B:2-181 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4k9oB1 B:182-341 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e4k9oB2 B:342-526 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4k9oC3 C:2-181 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4k9oC1 C:182-341 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e4k9oC2 C:342-525 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4k9oD3 D:2-181 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4k9oD1 D:182-341 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e4k9oD2 D:342-525 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Structural contacts of domain e4k9oC1 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4k9oA2 C:x,y,z->A:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e4k9oD3 C:X,Y,Z->D:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e4k9oD1 C:X,Y,Z->D:x,y,z Rossmann-related Interaction Interface Pymol
e4k9oB2 C:x,y,z->B:-X-3/2,-Y,Z-1/2 Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e4k9oC3 C:x,y,z->C:X-1,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e4k9oA3 C:x,y,z->A:-X-1,Y-1/2,-Z-1/2 Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol