Domain ID e4kbtH1

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  • A: a+b two layers
  • X: R3H domain-like
  • H: Ribosomal protein S8, N-terminal domain
  • T: Ribosomal protein S8, N-terminal domain
  • F: Ribosomal_S8
UID: 001064987
Type: Automatic domain
Parent: e1seiA1
Range: H:1-66
PDB: 4kbt
PDB Description:
Species:

Structure of domain e4kbtH1

Domains in the same chain:

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e4kbtH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4kbtH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain

Domains in the same PDB:

e4kbtC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4kbtC1 C:107-208 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4kbtE2 E:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4kbtE1 E:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4kbtF1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4kbtG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4kbtH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4kbtH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4kbtJ1 J:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4kbtK1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4kbtL1 L:5-129 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4kbtN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4kbtO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4kbtP1 P:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4kbtR1 R:19-88 HTH HTH tri-helical
e4kbtT1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4kbtY6 Y:4-284 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4kbtY7 Y:283-403 cradle loop barrel RIFT-related Alanine racemase-C
e4kbtY9 Y:404-482 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e4kbtY8 Y:483-599 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4kbtY10 Y:600-690 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like

Structural contacts of domain e4kbtH1 of H-group "Ribosomal protein S8, N-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4kbtE1 H:x,y,z->E:X,Y,Z Ribosomal protein S5 domain 2-like Interaction Interface Pymol