Domain ID e4kcz01

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  • A: a+b complex topology
  • X: alpha/beta-Hammerhead/Barrel-sandwich hybrid
  • H: alpha/beta-Hammerhead/Barrel-sandwich hybrid
  • T: Ribosomal L27 protein
  • F: Ribosomal_L27
UID: 001065157
Type: Automatic domain
Parent: e3j6bR1
Range: 0:2-85
PDB: 4kcz
PDB Description:
Hsap BLAST neighbor: Q9P0M9
Species:

Structure of domain e4kcz01

Domains in the same chain:

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e4kcz01 0:2-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein

Domains in the same PDB:

e4kcz01 0:2-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4kcz11 1:3-95 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4kcz21 2:2-72 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4kcz31 3:1-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4kcz41 4:1-35 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4kcz51 5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4kcz71 7:1-49 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4kcz81 8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4kcz91 9:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4kczC4 C:2-68,C:161-229 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e4kczC3 C:69-160 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e4kczD1 D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4kczD2 D:127-276 SH3 SH3 SH3
e4kcze1 e:1-122 ClpS-like ClpS-related ClpS-related
e4kczF1 F:1-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4kczG1 G:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4kczH1 H:12-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4kczH2 H:83-178 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4kczK2 K:2-69 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e4kczK1 K:70-141 HTH HTH Ribosomal protein L11, C-terminal domain
e4kczN1 N:1-138 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4kczO1 O:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4kczR1 R:2-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4kczU1 U:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4kczV1 V:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4kczW1 W:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4kczX1 X:3-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4kczY1 Y:2-108 SH3 SH3 SH3
e4kczZ1 Z:3-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4kczZ2 Z:93-187 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related

Structural contacts of domain e4kcz01 of H-group "alpha/beta-Hammerhead/Barrel-sandwich hybrid":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3j6bR1 0:x,y,z->Q:X,Y,Z alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol