Domain ID e4kd0C1

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  • A: a+b two layers
  • X: T-fold
  • H: Ribosomal protein S3-C
  • T: Ribosomal protein S3-C
  • F: Ribosomal_S3_C
UID: 001065169
Type: Automatic domain
Parent: e2uubC1
Range: C:107-208
PDB: 4kd0
PDB Description:
Species:

Structure of domain e4kd0C1

Domains in the same chain:

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e4kd0C2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4kd0C1 C:107-208 T-fold Ribosomal protein S3-C Ribosomal protein S3-C

Domains in the same PDB:

e4kd0C2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4kd0C1 C:107-208 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4kd0E2 E:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4kd0E1 E:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4kd0F1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4kd0G1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4kd0H1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4kd0H2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4kd0J1 J:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4kd0K1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4kd0L1 L:5-129 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4kd0N1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4kd0O1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4kd0P1 P:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4kd0R1 R:19-88 HTH HTH tri-helical
e4kd0T1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4kd0Y6 Y:4-284 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4kd0Y7 Y:283-403 cradle loop barrel RIFT-related Alanine racemase-C
e4kd0Y9 Y:404-482 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e4kd0Y8 Y:483-599 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4kd0Y10 Y:600-690 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like

Structural contacts of domain e4kd0C1 of H-group "Ribosomal protein S3-C":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4kd0N1 C:X,Y,Z->N:x,y,z LIM domain-like Interaction Interface Pymol
e4kd0E2 C:X,Y,Z->E:x,y,z dsRNA-binding domain-like Interaction Interface Pymol