Domain ID e4kd971

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  • A: extended segments
  • X: 50S ribosomal protein L34
  • H: 50S ribosomal protein L34
  • T: 50S ribosomal protein L34
  • F: Ribosomal_L34
UID: 001065288
Type: Automatic domain
Parent: e2wdi71
Range: 7:1-49
PDB: 4kd9
PDB Description:
Species:

Structure of domain e4kd971

Domains in the same chain:

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e4kd971 7:1-49 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34

Domains in the same PDB:

e4kd901 0:2-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4kd911 1:3-95 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4kd921 2:2-72 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4kd931 3:1-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4kd941 4:1-35 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4kd951 5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4kd971 7:1-49 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4kd981 8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4kd991 9:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4kd9C4 C:2-68,C:161-229 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e4kd9C3 C:69-160 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e4kd9D1 D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4kd9D2 D:127-276 SH3 SH3 SH3
e4kd9e1 e:59-122 ClpS-like ClpS-related ClpS-related
e4kd9F1 F:1-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4kd9G1 G:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4kd9H1 H:12-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4kd9H2 H:83-178 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4kd9K2 K:2-69 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e4kd9K1 K:70-141 HTH HTH Ribosomal protein L11, C-terminal domain
e4kd9N1 N:1-138 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4kd9O1 O:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4kd9R1 R:2-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4kd9U1 U:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4kd9V1 V:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4kd9W1 W:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4kd9X1 X:3-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4kd9Y1 Y:2-108 SH3 SH3 SH3
e4kd9Z1 Z:3-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4kd9Z2 Z:93-187 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related

Structural contacts of domain e4kd971 of H-group "50S ribosomal protein L34":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4kd9X1 7:x,y,z->X:X,Y,Z Ribosomal proteins S24e, L23 and L15e Interaction Interface Pymol