ECOD: domain e4kfzB1

Domain ID e4kfzB1

A: few secondary structure elements
X: Glucocorticoid receptor-like
H: LIM domain-like
T: LIM domain-like
F: LIM

UID:	001140609
Type:	Automatic domain
Parent:	e2l6yB2
Range:	B:120-156
Ligands:	ZN
PDB:	4kfz
PDB Description:	LMO-2
UniProt:	P25791
Hsap BLAST neighbor:	P25791
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e4kfzB1

Domains in the same chain:

Download Pymol

e4kfzB3	B:9-55	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4kfzB4	B:55-84	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4kfzB2	B:84-120	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4kfzB1	B:120-156	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like

Domains in the same PDB:

e4kfzA2	A:11-55	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4kfzA4	A:55-84	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4kfzA1	A:84-120	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4kfzA3	A:120-156	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4kfzB3	B:9-55	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4kfzB4	B:55-84	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4kfzB2	B:84-120	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4kfzB1	B:120-156	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4kfzC1	C:-2-124	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4kfzD1	D:-3-123	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e4kfzB1 of H-group "LIM domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4kfzD1	B:X,Y,Z->D:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e4kfzD1	B:x,y,z->D:X-Y,X,Z	Immunoglobulin-related	Interaction Interface Pymol
e4kfzD1	B:-X,-Y-1,Z->D:x,y,z	Immunoglobulin-related	Interaction Interface Pymol