Domain ID e4kyiA2

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  • A: alpha bundles
  • X: ExoU toxin middle helical domain
  • H: ExoU toxin middle helical domain
  • T: ExoU toxin middle helical domain
  • F: VipD-like_C
UID: 001780749
Type: Automatic and representative domain
Parent: e4akxB2
Range: A:426-557
Ligands: EDO GOL
PDB: 4kyi
PDB Description: VipD
UniProt: Q5ZRP9
Species:

Structure of domain e4kyiA2

Domains in the same chain:

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e4kyiA1 A:17-401 Flavodoxin-like Class I glutamine amidotransferase-like FabD/lysophospholipase-like
e4kyiA2 A:426-557 ExoU toxin middle helical domain ExoU toxin middle helical domain ExoU toxin middle helical domain

Domains in the same PDB:

e4kyiA1 A:17-401 Flavodoxin-like Class I glutamine amidotransferase-like FabD/lysophospholipase-like
e4kyiA2 A:426-557 ExoU toxin middle helical domain ExoU toxin middle helical domain ExoU toxin middle helical domain
e4kyiB1 B:19-182 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4kyiC3 C:17-412 Flavodoxin-like Class I glutamine amidotransferase-like FabD/lysophospholipase-like
e4kyiC2 C:413-557 ExoU toxin middle helical domain ExoU toxin middle helical domain ExoU toxin middle helical domain
e4kyiD1 D:19-182 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4kyiE3 E:17-412 Flavodoxin-like Class I glutamine amidotransferase-like FabD/lysophospholipase-like
e4kyiE2 E:413-558 ExoU toxin middle helical domain ExoU toxin middle helical domain ExoU toxin middle helical domain
e4kyiF1 F:19-182 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4kyiG1 G:17-401 Flavodoxin-like Class I glutamine amidotransferase-like FabD/lysophospholipase-like
e4kyiG2 G:427-556 ExoU toxin middle helical domain ExoU toxin middle helical domain ExoU toxin middle helical domain
e4kyiH1 H:19-182 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e4kyiA2 of H-group "ExoU toxin middle helical domain":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4kyiC2 A:X,Y,Z->C:x,y,z ExoU toxin middle helical domain Interaction Interface Pymol
e4kyiB1 A:X,Y,Z->B:x,y,z P-loop domains-related Interaction Interface Pymol
e4kyiE3 A:X,Y,Z->E:x,y,z Class I glutamine amidotransferase-like Interaction Interface Pymol
e4kyiA1 A:x,y,z->A:X-1,Y,Z Class I glutamine amidotransferase-like Interaction Interface Pymol