Domain ID e4l6j31

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  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Rubredoxin-related
  • F: Ribosomal_L33
UID: 001086649
Type: Automatic domain
Parent: e2j0161
Range: 3:9-52
Ligands: MG
PDB: 4l6j
PDB Description:
Species:

Structure of domain e4l6j31

Domains in the same chain:

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e4l6j31 3:9-52 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Domains in the same PDB:

e4l6j11 1:36-65 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4l6j21 2:2-53 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4l6j31 3:9-52 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4l6j41 4:1-48 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4l6j51 5:2-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4l6jD1 D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4l6jD2 D:127-272 SH3 SH3 SH3
e4l6jF1 F:6-207 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4l6jG1 G:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4l6jH1 H:12-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4l6jH2 H:83-170 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4l6jI4 I:1-52 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4l6jI3 I:53-145 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4l6jJ1 J:25-161 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4l6jK1 K:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4l6jN1 N:2-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4l6jQ1 Q:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4l6jR1 R:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4l6jS1 S:1-112 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4l6jT1 T:3-94 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4l6jU1 U:2-101 SH3 SH3 SH3
e4l6jV1 V:3-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4l6jV2 V:93-189 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e4l6jW1 W:10-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4l6jX1 X:8-95 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4l6jY1 Y:1-62 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4l6jZ1 Z:1-59 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e

Structural contacts of domain e4l6j31 of H-group "Rubredoxin-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4l6j51 3:X,Y,Z->5:x,y,z Ribosomal protein L35p Interaction Interface Pymol