Domain ID e4l6mE1

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  • A: a+b two layers
  • X: Ribosomal protein S5 domain 2-like
  • H: Ribosomal protein S5 domain 2-like
  • T: Ribosomal protein S5 domain 2-like
  • F: Ribosomal_S5_C
UID: 001086710
Type: Automatic domain
Parent: e1pkpA2
Range: E:74-155
PDB: 4l6m
PDB Description:
Species:

Structure of domain e4l6mE1

Domains in the same chain:

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e4l6mE2 E:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4l6mE1 E:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e4l6mC2 C:2-105 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4l6mC1 C:106-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4l6mE2 E:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4l6mE1 E:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4l6mF1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4l6mG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4l6mH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4l6mH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4l6mJ1 J:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4l6mK1 K:11-124 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4l6mL1 L:4-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4l6mN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4l6mO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4l6mP1 P:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4l6mR1 R:19-88 HTH HTH tri-helical
e4l6mT1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e4l6mE1 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4l6mH1 E:X,Y,Z->H:x,y,z Ribosomal protein S8, N-terminal domain Interaction Interface Pymol
e4l6mH2 E:X,Y,Z->H:x,y,z Ribosomal protein S8, C-terminal domain Interaction Interface Pymol