Domain ID e4m5dA5

Download files:
  • A: alpha arrays
  • X: HhH/H2TH
  • H: SAM/DNA-glycosylase
  • T: PAP/OAS1 substrate-binding domain
  • F: Nrap_D5
UID: 001117796
Type: Manual and representative domain
Range: A:906-1091
Ligands: PGE SO4
PDB: 4m5d
PDB Description: U3 small nucleolar RNA-associated protein 22
UniProt: P53254
Hsap BLAST neighbor: Q9H6R4
Species:

Structure of domain e4m5dA5

Structural contacts of domain e4m5dA5 of H-group "SAM/DNA-glycosylase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4m5dA1 A:x,y,z->A:X,-Y+1,-Z Nucleotidyltransferase Interaction Interface Pymol
e4m5dA5 A:x,y,z->A:X,-Y+1,-Z SAM/DNA-glycosylase Interaction Interface Pymol
e4m5dA5 A:X,-Y+1,-Z->A:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol
e4m5dA1 A:X,-Y+1,-Z->A:x,y,z Nucleotidyltransferase Interaction Interface Pymol
e4m5dA6 A:x,y,z->A:-X+1,-Y+1,Z PAP/Archaeal CCA-adding enzyme, C-terminal domain Interaction Interface Pymol
e4m5dA6 A:-X+1,-Y+1,Z->A:x,y,z PAP/Archaeal CCA-adding enzyme, C-terminal domain Interaction Interface Pymol