| UID: | 001117798 |
|---|---|
| Type: | Manual and representative domain |
| Range: | B:3-189 |
| Ligands: | PGE |
| PDB: | 4m5d |
| PDB Description: | Ribosomal RNA-processing protein 7 |
| UniProt: | P25368 |
| Species: |
Structure of domain e4m5dB1
Domains in the same chain:
| e4m5dB1 | B:3-189 | Alpha-beta plaits | RNA-binding domain, RBD | RNA-binding domain, RBD |
Domains in the same PDB:
Structural contacts of domain e4m5dB1 of H-group "RNA-binding domain, RBD":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e4m5dA6 | B:x,y,z->A:X,Y,Z | PAP/Archaeal CCA-adding enzyme, C-terminal domain | Interaction Interface Pymol |
| e4m5dA4 | B:x,y,z->A:X,Y,Z | Nucleotidyltransferase | Interaction Interface Pymol |
| e4m5dA3 | B:-X+1/2,Y-1/2,-Z+1/2->A:x,y,z | PAP/Archaeal CCA-adding enzyme, C-terminal domain | Interaction Interface Pymol |
| e4m5dA4 | B:X-1/2,-Y+3/2,-Z+1/2->A:x,y,z | Nucleotidyltransferase | Interaction Interface Pymol |
| e4m5dB1 | B:x,y,z->B:X-1/2,-Y+3/2,-Z+1/2 | RNA-binding domain, RBD | Interaction Interface Pymol |
| e4m5dB1 | B:X-1/2,-Y+3/2,-Z+1/2->B:x,y,z | RNA-binding domain, RBD | Interaction Interface Pymol |
