Domain ID e4mfbA8

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  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: Ribonuclease H-like
  • T: Ribonuclease H-like
  • F: RNase_H
UID: 001186967
Type: Automatic domain
Parent: e1mu2A3
Range: A:428-547
PDB: 4mfb
PDB Description: HIV-1 reverse transcriptase, p66 subunit
UniProt: P03366
Hsap BLAST neighbor: P10266
Species:

Structure of domain e4mfbA8

Domains in the same chain:

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e4mfbA7 A:4-239 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4mfbA6 A:240-316 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e4mfbA5 A:317-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e4mfbA8 A:428-547 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like

Domains in the same PDB:

e4mfbA7 A:4-239 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4mfbA6 A:240-316 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e4mfbA5 A:317-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e4mfbA8 A:428-547 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4mfbB9 B:4-230 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4mfbB7 B:231-304 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e4mfbB8 B:305-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase

Structural contacts of domain e4mfbA8 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4mfbB7 A:X,Y,Z->B:x,y,z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol