Domain ID e4nawB7

Download files:
  • A: a+b two layers
  • X: beta-Grasp
  • H: Ubiquitin-related
  • T: Ubiquitin-like
  • F: ATG5_UblB
UID: 001210602
Type: Automatic domain
Parent: e2dymA3
Range: B:177-274
Ligands: SO4
PDB: 4naw
PDB Description: Autophagy protein 5
UniProt: Q9H1Y0
Hsap BLAST neighbor: Q9H1Y0
Species: Homo sapiens

Structure of domain e4nawB7

Domains in the same chain:

e4nawB6 B:2-115 beta-Grasp Ubiquitin-related Ubiquitin-like
e4nawB8 B:116-176 Helical domain in autophagy protein 5 Helical domain in autophagy protein 5 Helical domain in autophagy protein 5
e4nawB7 B:177-274 beta-Grasp Ubiquitin-related Ubiquitin-like

Domains in the same PDB:

e4nawA1 A:53-140 beta-Grasp Ubiquitin-related Ubiquitin-like
e4nawB6 B:2-115 beta-Grasp Ubiquitin-related Ubiquitin-like
e4nawB8 B:116-176 Helical domain in autophagy protein 5 Helical domain in autophagy protein 5 Helical domain in autophagy protein 5
e4nawB7 B:177-274 beta-Grasp Ubiquitin-related Ubiquitin-like
e4nawE1 E:53-140 beta-Grasp Ubiquitin-related Ubiquitin-like
e4nawF6 F:3-115 beta-Grasp Ubiquitin-related Ubiquitin-like
e4nawF8 F:116-176 Helical domain in autophagy protein 5 Helical domain in autophagy protein 5 Helical domain in autophagy protein 5
e4nawF7 F:177-273 beta-Grasp Ubiquitin-related Ubiquitin-like
e4nawI1 I:53-140 beta-Grasp Ubiquitin-related Ubiquitin-like
e4nawJ6 J:4-115 beta-Grasp Ubiquitin-related Ubiquitin-like
e4nawJ8 J:116-176 Helical domain in autophagy protein 5 Helical domain in autophagy protein 5 Helical domain in autophagy protein 5
e4nawJ7 J:177-272 beta-Grasp Ubiquitin-related Ubiquitin-like
e4nawM1 M:53-140 beta-Grasp Ubiquitin-related Ubiquitin-like
e4nawN2 N:3-115 beta-Grasp Ubiquitin-related Ubiquitin-like
e4nawN6 N:116-176 Helical domain in autophagy protein 5 Helical domain in autophagy protein 5 Helical domain in autophagy protein 5
e4nawN5 N:177-273 beta-Grasp Ubiquitin-related Ubiquitin-like

Structural contacts of domain e4nawB7 of H-group "Ubiquitin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4nawA1 B:x,y,z->A:X,Y,Z Ubiquitin-related Interaction Interface Pymol
e4nawJ8 B:X,Y,Z->J:x,y,z Helical domain in autophagy protein 5 Interaction Interface Pymol
e4nawF7 B:-X,Y-1/2,-Z+1/2->F:x,y,z Ubiquitin-related Interaction Interface Pymol