Domain ID e4nnjD1

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  • A: a+b two layers
  • X: beta-Grasp
  • H: Ubiquitin-related
  • T: Ubiquitin-like
  • F: ubiquitin
UID: 001289225
Type: Automatic domain
Parent: e1ogwA1
Range: D:0-76
Ligands: AMP SO4
PDB: 4nnj
PDB Description: Uba1
UniProt: P0CG63
Hsap BLAST neighbor: P62987
Species:

Structure of domain e4nnjD1

Domains in the same chain:

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e4nnjD1 D:0-76 beta-Grasp Ubiquitin-related Ubiquitin-like

Domains in the same PDB:

e4nnjA5 A:11-174,A:261-284,A:357-405 Rossmann-like Rossmann-related Activating enzymes of the ubiquitin-like proteins
e4nnjA3 A:175-260 cradle loop barrel RIFT-related Alanine racemase-C
e4nnjA2 A:285-356 Catalytic cysteine domain in ubiquitin-activating enzyme Catalytic cysteine domain in ubiquitin-activating enzyme Catalytic cysteine domain in ubiquitin-activating enzyme
e4nnjA6 A:406-593,A:863-913 Rossmann-like Rossmann-related Activating enzymes of the ubiquitin-like proteins
e4nnjA4 A:594-862 Catalytic cysteine domain in ubiquitin-activating enzyme Catalytic cysteine domain in ubiquitin-activating enzyme Catalytic cysteine domain in ubiquitin-activating enzyme
e4nnjA1 A:914-1024 beta-Grasp E2-binding domain of E1 E2-binding domain of E1
e4nnjB1 B:-1-76 beta-Grasp Ubiquitin-related Ubiquitin-like
e4nnjC5 C:11-174,C:261-284,C:357-405 Rossmann-like Rossmann-related Activating enzymes of the ubiquitin-like proteins
e4nnjC3 C:175-260 cradle loop barrel RIFT-related Alanine racemase-C
e4nnjC6 C:285-356 Catalytic cysteine domain in ubiquitin-activating enzyme Catalytic cysteine domain in ubiquitin-activating enzyme Catalytic cysteine domain in ubiquitin-activating enzyme
e4nnjC7 C:406-593,C:863-913 Rossmann-like Rossmann-related Activating enzymes of the ubiquitin-like proteins
e4nnjC1 C:594-862 Catalytic cysteine domain in ubiquitin-activating enzyme Catalytic cysteine domain in ubiquitin-activating enzyme Catalytic cysteine domain in ubiquitin-activating enzyme
e4nnjC4 C:914-1024 beta-Grasp E2-binding domain of E1 E2-binding domain of E1
e4nnjD1 D:0-76 beta-Grasp Ubiquitin-related Ubiquitin-like
e4nnjE1 E:0-76 beta-Grasp Ubiquitin-related Ubiquitin-like

Structural contacts of domain e4nnjD1 of H-group "Ubiquitin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4nnjC7 D:x,y,z->C:X,Y,Z Rossmann-related Interaction Interface Pymol
e4nnjC1 D:x,y,z->C:X,Y,Z Catalytic cysteine domain in ubiquitin-activating enzyme Interaction Interface Pymol
e4nnjC5 D:x,y,z->C:X,Y,Z Rossmann-related Interaction Interface Pymol
e4nnjC3 D:x,y,z->C:X,Y,Z RIFT-related Interaction Interface Pymol
e4nnjE1 D:X,Y,Z->E:x,y,z Ubiquitin-related Interaction Interface Pymol