ECOD: domain e4nqkF1

Domain ID e4nqkF1

A: a+b two layers
X: beta-Grasp
H: Ubiquitin-related
T: Ubiquitin-like
F: ubiquitin

UID:	001283302
Type:	Automatic domain
Parent:	e1ogwA1
Range:	F:1-73
PDB:	4nqk
PDB Description:	Ubiquitin
UniProt:	P0CG48
Hsap BLAST neighbor:	P62979
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e4nqkF1

Domains in the same chain:

Download Pymol

e4nqkF1	F:1-73	beta-Grasp	Ubiquitin-related	Ubiquitin-like

Domains in the same PDB:

e4nqkA2	A:1-94	DEATH domain	DEATH domain	DEATH domain
e4nqkA1	A:95-188	DEATH domain	DEATH domain	DEATH domain
e4nqkB1	B:1-94	DEATH domain	DEATH domain	DEATH domain
e4nqkB2	B:95-188	DEATH domain	DEATH domain	DEATH domain
e4nqkC2	C:1-94	DEATH domain	DEATH domain	DEATH domain
e4nqkC1	C:95-188	DEATH domain	DEATH domain	DEATH domain
e4nqkD2	D:1-94	DEATH domain	DEATH domain	DEATH domain
e4nqkD1	D:95-188	DEATH domain	DEATH domain	DEATH domain
e4nqkE1	E:1-72	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e4nqkF1	F:1-73	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e4nqkG1	G:1-71	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e4nqkH1	H:1-75	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e4nqkI1	I:1-71	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e4nqkJ1	J:1-73	beta-Grasp	Ubiquitin-related	Ubiquitin-like

Structural contacts of domain e4nqkF1 of H-group "Ubiquitin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4nqkB2	F:x,y,z->B:X,Y,Z	DEATH domain	Interaction Interface Pymol
e4nqkB1	F:x,y,z->B:X,Y,Z	DEATH domain	Interaction Interface Pymol
e4nqkI1	F:x,y,z->I:-X,Y-1/2,-Z	Ubiquitin-related	Interaction Interface Pymol
e4nqkH1	F:X-1,Y,Z->H:x,y,z	Ubiquitin-related	Interaction Interface Pymol
e4nqkG1	F:X,Y,Z->G:x,y,z	Ubiquitin-related	Interaction Interface Pymol