Domain ID e4nvwK1

Download files:
  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: Ribonuclease H-like
  • T: Ribonuclease H-like
  • F: Ribosomal_S11
UID: 001284786
Type: Automatic domain
Parent: e2uubK1
Range: K:13-126
Ligands: MG
PDB: 4nvw
PDB Description:
Hsap BLAST neighbor: P82912
Species:

Structure of domain e4nvwK1

Domains in the same chain:

Download Pymol

e4nvwK1 K:13-126 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like

Domains in the same PDB:

e4nvwC1 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4nvwC2 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4nvwE2 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4nvwE1 E:73-152 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4nvwF1 F:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4nvwG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4nvwH1 H:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4nvwH2 H:77-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4nvwJ1 J:5-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4nvwK1 K:13-126 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4nvwL1 L:5-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4nvwN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4nvwO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4nvwP1 P:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4nvwR1 R:20-87 HTH HTH tri-helical
e4nvwT1 T:8-103 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e4nvwK1 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4nvwR1 K:X,Y,Z->R:x,y,z HTH Interaction Interface Pymol
e4nvwG1 K:x,y,z->G:X,Y,Z Ribosomal protein S7 Interaction Interface Pymol