Domain ID e4nvxN1

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  • A: a/b three-layered sandwiches
  • X: Ribosomal protein L13/L15p/L18e/L32e
  • H: Ribosomal protein L13 and L16-A
  • T: Ribosomal protein L13 and L16-A
  • F: Ribosomal_L13
UID: 001284805
Type: Automatic domain
Parent: e4v19N1
Range: N:1-140
Ligands: MG
PDB: 4nvx
PDB Description:
Hsap BLAST neighbor: Q9BYD1
Species:

Structure of domain e4nvxN1

Domains in the same chain:

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e4nvxN1 N:1-140 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A

Domains in the same PDB:

e4nvx01 0:2-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4nvx11 1:2-98 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4nvx21 2:1-70 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4nvx31 3:2-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4nvx41 4:1-69 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4nvx51 5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4nvx71 7:1-48 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4nvx81 8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4nvx91 9:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4nvxD1 D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4nvxD2 D:127-276 SH3 SH3 SH3
e4nvxF1 F:6-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4nvxG1 G:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4nvxH1 H:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4nvxH2 H:83-175 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4nvxI2 I:1-52 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4nvxI1 I:53-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4nvxN1 N:1-140 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4nvxO1 O:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4nvxR1 R:1-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4nvxU1 U:2-117 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4nvxV1 V:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4nvxW1 W:1-112 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4nvxX1 X:1-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4nvxY1 Y:1-107 SH3 SH3 SH3
e4nvxZ1 Z:1-93 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4nvxZ2 Z:94-174 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related

Structural contacts of domain e4nvxN1 of H-group "Ribosomal protein L13 and L16-A":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4nvxU1 N:X,Y,Z->U:x,y,z Ribosomal protein L20 Interaction Interface Pymol
e4nvxU1 N:x,y,z->E:X,Y,Z Ribosomal protein L20 Interaction Interface Pymol
e4nvxV1 N:X,Y,Z->V:x,y,z Ribosomal protein L21p Interaction Interface Pymol