Domain ID e4nvyJ1

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Ribosomal protein S10
  • T: Ribosomal protein S10
  • F: Ribosomal_S10
UID: 001284838
Type: Automatic domain
Parent: e2uubJ1
Range: J:4-100
Ligands: MG
PDB: 4nvy
PDB Description:
Hsap BLAST neighbor: P60866
Species:

Structure of domain e4nvyJ1

Domains in the same chain:

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e4nvyJ1 J:4-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10

Domains in the same PDB:

e4nvyC1 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4nvyC2 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4nvyE2 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4nvyE1 E:73-152 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4nvyF1 F:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4nvyG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4nvyH1 H:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4nvyH2 H:77-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4nvyJ1 J:4-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4nvyK1 K:13-126 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4nvyL1 L:5-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4nvyN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4nvyO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4nvyP1 P:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4nvyR1 R:20-87 HTH HTH tri-helical
e4nvyT1 T:8-103 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e4nvyJ1 of H-group "Ribosomal protein S10":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4nvyN1 J:X,Y,Z->N:x,y,z LIM domain-like Interaction Interface Pymol
e4nvyC1 J:x,y,z->C:X,Y,Z KH-domains Interaction Interface Pymol