Domain ID e4nvzG1

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  • A: a+b two layers
  • X: Ribosomal protein L5
  • H: Ribosomal protein L5
  • T: Ribosomal protein L5
  • F: Ribosomal_L5,Ribosomal_L5_C
UID: 001284853
Type: Automatic domain
Parent: e1iq4A1
Range: G:2-182
Ligands: MG
PDB: 4nvz
PDB Description:
Hsap BLAST neighbor: P62913
Species:

Structure of domain e4nvzG1

Domains in the same chain:

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e4nvzG1 G:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5

Domains in the same PDB:

e4nvz01 0:2-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4nvz11 1:2-98 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4nvz21 2:1-70 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4nvz31 3:2-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4nvz41 4:1-69 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4nvz51 5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4nvz71 7:1-48 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4nvz81 8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4nvz91 9:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4nvzD1 D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4nvzD2 D:127-276 SH3 SH3 SH3
e4nvzF1 F:6-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4nvzG1 G:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4nvzH1 H:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4nvzH2 H:83-175 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4nvzI2 I:1-52 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4nvzI1 I:53-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4nvzN1 N:1-140 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4nvzO1 O:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4nvzR1 R:1-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4nvzU1 U:2-117 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4nvzV1 V:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4nvzW1 W:1-112 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4nvzX1 X:1-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4nvzY1 Y:1-107 SH3 SH3 SH3
e4nvzZ1 Z:1-93 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4nvzZ2 Z:94-171 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related

Structural contacts of domain e4nvzG1 of H-group "Ribosomal protein L5":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4nvz41 G:X,Y,Z->4:x,y,z Ribosomal protein L31p Interaction Interface Pymol