Domain ID e4o1oB1

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  • A: alpha bundles
  • X: Four-helical up-and-down bundle
  • H: HEPN
  • T: Nucleotidyltransferase substrate binding subunit/domain
  • F: Ribonuc_2-5A
UID: 001282148
Type: Automatic domain
Parent: e4o1pC3
Range: B:570-643,B:663-729
PDB: 4o1o
PDB Description: Ribonuclease L
UniProt: A5H025
Hsap BLAST neighbor: Q05823
Species: Sus scrofa

Structure of domain e4o1oB1

Domains in the same chain:

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e4o1oB3 B:22-322 Repetitive alpha hairpins Ankyrin repeat Ankyrin repeat
e4o1oB2 B:323-569 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e4o1oB1 B:570-643,B:663-729 Four-helical up-and-down bundle HEPN Nucleotidyltransferase substrate binding subunit/domain

Domains in the same PDB:

e4o1oA3 A:22-322 Repetitive alpha hairpins Ankyrin repeat Ankyrin repeat
e4o1oA2 A:323-569 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e4o1oA1 A:570-643,A:663-729 Four-helical up-and-down bundle HEPN Nucleotidyltransferase substrate binding subunit/domain
e4o1oB3 B:22-322 Repetitive alpha hairpins Ankyrin repeat Ankyrin repeat
e4o1oB2 B:323-569 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e4o1oB1 B:570-643,B:663-729 Four-helical up-and-down bundle HEPN Nucleotidyltransferase substrate binding subunit/domain
e4o1oC3 C:22-322 Repetitive alpha hairpins Ankyrin repeat Ankyrin repeat
e4o1oC2 C:323-569 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e4o1oC1 C:570-643,C:663-729 Four-helical up-and-down bundle HEPN Nucleotidyltransferase substrate binding subunit/domain
e4o1oD3 D:22-322 Repetitive alpha hairpins Ankyrin repeat Ankyrin repeat
e4o1oD2 D:323-569 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e4o1oD1 D:570-643,D:663-729 Four-helical up-and-down bundle HEPN Nucleotidyltransferase substrate binding subunit/domain

Structural contacts of domain e4o1oB1 of H-group "HEPN":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4o1oA1 B:x,y,z->A:X,Y,Z HEPN Interaction Interface Pymol