Domain ID e4ogcA1

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  • A: alpha complex topology
  • X: CRISPR-associated endonuclease Cas9 alpha-helical lobe
  • H: CRISPR-associated endonuclease Cas9 alpha-helical lobe
  • T: CRISPR-associated endonuclease Cas9 alpha-helical lobe
  • F: Cas9_a
UID: 001144781
Type: Manual domain
Parent: e4ogeA1
Range: A:253-467
PDB: 4ogc
PDB Description: HNH ENDONUCLEASE DOMAIN PROTEIN
UniProt: J3F2B0
Species:

Structure of domain e4ogcA1

Domains in the same chain:

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e4ogcA2 A:8-49,A:468-513,A:674-822 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4ogcA1 A:253-467 CRISPR-associated endonuclease Cas9 alpha-helical lobe CRISPR-associated endonuclease Cas9 alpha-helical lobe CRISPR-associated endonuclease Cas9 alpha-helical lobe
e4ogcA3 A:514-673 His-Me finger endonucleases His-Me finger endonucleases His-Me finger endonucleases
e4ogcA6 A:823-923 CRISPR-associated endonuclease Cas9 beta-hairpin domain CRISPR-associated endonuclease Cas9 beta-hairpin domain CRISPR-associated endonuclease Cas9 beta-hairpin domain
e4ogcA4 A:924-995 SSHS domain SSHS domain in CRISPR-associated endonuclease Cas9 SSHS domain in CRISPR-associated endonuclease Cas9
e4ogcA5 A:996-1101 CRISPR-associated endonuclease Cas9 C-terminal domain CRISPR-associated endonuclease Cas9 C-terminal domain CRISPR-associated endonuclease Cas9 C-terminal domain

Domains in the same PDB:

e4ogcA2 A:8-49,A:468-513,A:674-822 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4ogcA1 A:253-467 CRISPR-associated endonuclease Cas9 alpha-helical lobe CRISPR-associated endonuclease Cas9 alpha-helical lobe CRISPR-associated endonuclease Cas9 alpha-helical lobe
e4ogcA3 A:514-673 His-Me finger endonucleases His-Me finger endonucleases His-Me finger endonucleases
e4ogcA6 A:823-923 CRISPR-associated endonuclease Cas9 beta-hairpin domain CRISPR-associated endonuclease Cas9 beta-hairpin domain CRISPR-associated endonuclease Cas9 beta-hairpin domain
e4ogcA4 A:924-995 SSHS domain SSHS domain in CRISPR-associated endonuclease Cas9 SSHS domain in CRISPR-associated endonuclease Cas9
e4ogcA5 A:996-1101 CRISPR-associated endonuclease Cas9 C-terminal domain CRISPR-associated endonuclease Cas9 C-terminal domain CRISPR-associated endonuclease Cas9 C-terminal domain

Structural contacts of domain e4ogcA1 of H-group "CRISPR-associated endonuclease Cas9 alpha-helical lobe":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4ogcA6 A:x,y,z->A:X-1,Y,Z-1 CRISPR-associated endonuclease Cas9 beta-hairpin domain Interaction Interface Pymol
e4ogcA3 A:-X,Y-1/2,-Z->A:x,y,z His-Me finger endonucleases Interaction Interface Pymol